Pairwise Alignments

Query, 211 a.a., sel1 repeat family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 204 a.a., sodium-type flagellar protein MotX (RefSeq) from Shewanella amazonensis SB2B

 Score =  157 bits (396), Expect = 2e-43
 Identities = 82/184 (44%), Positives = 114/184 (61%), Gaps = 1/184 (0%)

Query: 28  EPVPIYSEAELIKLIEENKHLERVKADNCQIVEDIVARATRISLPSYEFLYGDMLAWGVC 87
           E V +Y++ +L+ LI   +HL RVK D+CQ+V+DI A A  +  P Y+FL+G+M   GVC
Sbjct: 20  EAVDVYTQEQLLSLIRSEQHLVRVKQDDCQLVQDIEAHAEVLKQPLYQFLWGEMFIHGVC 79

Query: 88  VDQDVELGLYYMENAAHQGLPAALEQLGRYYSRGTLVQQDKERAIPYLREAAAMGNLNAR 147
           + +DV  GL  +++AA QG   A+ Q+ RYY  G  V ++K R++ YL  AAA G+  AR
Sbjct: 80  IKKDVPRGLQLLKDAAGQGSTEAMLQVARYYEDGKYVLKNKHRSVQYLYPAAANGDQKAR 139

Query: 148 IQLAELLLRDYGSPLDYEDAYRWLYNSVTADQRTHNRIALLRQGLERRMPENIIARAKRR 207
           + L  L    +GSP DYE AY WLYN    DQ+T ++   L Q LE  MP + +ARA R 
Sbjct: 140 MMLVRLYNEGFGSPRDYEMAYHWLYNEAFNDQKTKDQAWGLLQKLESMMPASAVARA-RG 198

Query: 208 ETFW 211
           E  W
Sbjct: 199 EHLW 202