Pairwise Alignments

Query, 211 a.a., sel1 repeat family protein from Vibrio cholerae E7946 ATCC 55056

Subject, 693 a.a., Sel1 domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 32/101 (31%), Positives = 46/101 (45%), Gaps = 1/101 (0%)

Query: 79  GDMLAWGVCVDQDVELGLYYMENAAHQGLPAALEQLGRYYSRGTLVQQDKERAIPYLREA 138
           G++  +G  + QD +   Y+ E A  Q    A   LG  Y  G  V+QD E+AI   + A
Sbjct: 549 GNLFFFGNQIKQDYQQARYFYELALKQQDSTAANNLGEMYRLGLGVEQDIEQAISLYQSA 608

Query: 139 AAM-GNLNARIQLAELLLRDYGSPLDYEDAYRWLYNSVTAD 178
               G   A + L+EL L   G P+D +    WL  +   D
Sbjct: 609 VEWHGQATAMLNLSELYLEGEGVPVDEKLGLSWLKKAAETD 649



 Score = 43.1 bits (100), Expect = 1e-08
 Identities = 24/83 (28%), Positives = 40/83 (48%)

Query: 85  GVCVDQDVELGLYYMENAAHQGLPAALEQLGRYYSRGTLVQQDKERAIPYLREAAAMGNL 144
           G+  + D + G++Y++ A  Q   +A   L   Y  G  V+QDK+ AI   + AA +G+ 
Sbjct: 232 GIATEVDPKQGIHYLQLAVEQNHGSATGYLANMYDFGWFVEQDKKLAIQLYQRAAELGDA 291

Query: 145 NARIQLAELLLRDYGSPLDYEDA 167
            + + LA         P D + A
Sbjct: 292 GSMVNLATFFESGQFVPQDIDMA 314



 Score = 37.4 bits (85), Expect = 7e-07
 Identities = 23/66 (34%), Positives = 34/66 (51%)

Query: 90  QDVELGLYYMENAAHQGLPAALEQLGRYYSRGTLVQQDKERAIPYLREAAAMGNLNARIQ 149
           +D EL   +   AA Q    AL  L  +Y  G  V+QD ++AI Y R+A ++ +  A  +
Sbjct: 97  EDNELAFKWYLKAAKQKDTQALINLAAFYRNGEFVEQDLDQAIDYYRQAISLNDPIAFCE 156

Query: 150 LAELLL 155
           L  L L
Sbjct: 157 LGFLYL 162



 Score = 37.0 bits (84), Expect = 9e-07
 Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 7/79 (8%)

Query: 93  ELGLYYMENAAHQGLPAALEQLGRYYSRGTL-VQQDKERAIPYLREAAAMGNLNARIQLA 151
           E  L   + AA++GLP A  +LG  Y  G L  ++D E A  +  +AA   +  A I LA
Sbjct: 63  EKALKLYQEAANEGLPRAQSELGLIYDVGALGTKEDNELAFKWYLKAAKQKDTQALINLA 122

Query: 152 ------ELLLRDYGSPLDY 164
                 E + +D    +DY
Sbjct: 123 AFYRNGEFVEQDLDQAIDY 141



 Score = 29.3 bits (64), Expect = 2e-04
 Identities = 18/72 (25%), Positives = 33/72 (45%)

Query: 88  VDQDVELGLYYMENAAHQGLPAALEQLGRYYSRGTLVQQDKERAIPYLREAAAMGNLNAR 147
           ++ D++  + Y E A  QG       LG+ Y  G+    D + AI + ++     +  A 
Sbjct: 450 IEHDIDKAITYFEKAYSQGEIDPTASLGQIYEFGSPSHHDVDLAIAWYKKGIKGEHPYAY 509

Query: 148 IQLAELLLRDYG 159
           ++LA L +   G
Sbjct: 510 MRLALLYMNGEG 521