Pairwise Alignments

Query, 622 a.a., DUF3413 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 594 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  202 bits (514), Expect = 3e-56
 Identities = 157/607 (25%), Positives = 268/607 (44%), Gaps = 34/607 (5%)

Query: 18  IKKNIEWLFSHFILNAVLLAVLGLPYLQWMEVSSSNRVAYAYLSATQFGWFGLFAFAITL 77
           + + + W     + N  L  ++G  YL+ + +  +    + YL+    G F   AF + L
Sbjct: 13  VSRLVNWGHWFALFNGFLALIVGSRYLETVGLPET-LTGWGYLALASIGQFSFLAFLLYL 71

Query: 78  VSLALVWLP---SRLLHGVVFVASWAVSILLMVDIEVYQQYRFHLSGFVWDLLLHGGQQV 134
           + +  V L    S++L G+    +     +L+ D  VY  Y  HLS F +D+       +
Sbjct: 72  LLIFPVTLLLPYSKILRGLAATVATLGLCILLYDTIVYDDYGVHLSPFAFDVAWADLPSL 131

Query: 135 ISVSWYTLAMAGFIVFVVGFAQWLIMKLAQRIQHSRGVRWVSAVWLLSLLSSQFIHAWKD 194
           +S + Y +   G +   +  A +L  ++  +I+  R    V+AV     ++S  +H W D
Sbjct: 132 LSGTSYIVTPIGILALELTAANFLWKRIV-KIEKWRIGGKVAAVLGSCFIASHLVHIWAD 190

Query: 195 ATYDSEIPSYSYHWPLYYPLTAKRFFDQLGVVDAQSARRQQVDFHAPTSSTLNYPLRPLH 254
           A    +I  Y   +PL+YP TAK F +  G+  A    +            L Y L  L 
Sbjct: 191 AAKVKDITRYDDAYPLFYPATAKSFMESHGLDSAGGLSK------LGEQQQLGYSLDALS 244

Query: 255 IEPPAERPNILLIGIDAWRFDDANRDVTPNIAHFGQQATRFTHHLSGGNSTQAGLFSLFY 314
            +P   +PN+L++ +DA R D  N    P ++++G     F  HLSGGN  Q+G+FSLFY
Sbjct: 245 CKPQ-NKPNVLIVAVDALRADMLNPQTMPFLSNYGTDNQLFDKHLSGGNQFQSGMFSLFY 303

Query: 315 GLPATYWEEFQTSQTRPLLMQTLADLNYQFAIYGSAPLNSPPFDRTIFSKIAQLRTVTPG 374
           GL  +Y          PLL Q      Y    +G A     P    +F+       +   
Sbjct: 304 GLQGSYMAAPDFQTISPLLTQGFVTSGYALKRFGPASNEINPRPLALFNDF-DAALMDDS 362

Query: 375 ENSPQRDERITEDFLHFLEQRDRSKPYFGFLFYDSAHAADFPSSMTPPFTPYWERVDHIK 434
           E+    D +  E F  + +Q  ++ P+F  +   +    D P          +  ++ IK
Sbjct: 363 ESRALADIQSREAFEEWRKQ--QTSPWFALVNLGAPETYDTPVG--------FAGIETIK 412

Query: 435 LNNDFDP--EPYHNRYRNALYYADSLIGKVLEQLQARDELRNTIVIITSDHGEEFNDNRQ 492
                 P      ++YR +L++ DS +  ++  L A     +T+VIIT   G+ F  N  
Sbjct: 413 APQGMAPAQRVLFSQYRQSLHFIDSELKSLINHLPA-----DTLVIITGTSGKAFTSNEA 467

Query: 493 NYWGHGSNYSMAQIHVPLYIYIPDKEGSVLTHKTTHLDIAPMLMQEVLGVQNPLNEFALG 552
                  + S   + VPL I+ P  E + + + T+H  +AP LM  VLG  NP+ +++ G
Sbjct: 468 E---ARRDLSPQSVRVPLIIHWPGGEQAQVNYTTSHHGLAPTLMTRVLGCTNPITDYSAG 524

Query: 553 YPLWQESPQREWTIIGSYFNYALVSDKEMLVSYPTGRVETLNSELAPEKERQISTQQIMQ 612
             L   S Q  W  +G    +A+  D E+ V    G+ +  +S+      +++S   ++Q
Sbjct: 525 RQLLMPSEQ-PWVYVGDNRFFAIYQDDEITVIDRHGKYDIYSSDFKTRLNKKLSAPDLIQ 583

Query: 613 ALEEMRQ 619
            + E R+
Sbjct: 584 VMREGRR 590