Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 774 a.a., Transcription accessory protein (S1 RNA-binding domain) from Pseudomonas fluorescens FW300-N2E2

 Score = 49.7 bits (117), Expect = 6e-10
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 14/127 (11%)

Query: 652 GEELEGVVANVTSFGFFVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLG 711
           G  LEGVV NVT+FG FV +  +H DGLVHIS L+  +   DP              + G
Sbjct: 649 GMILEGVVTNVTNFGAFVDI-GVHQDGLVHISALSEKFIK-DP----------REAVKAG 696

Query: 712 DAVKVKVLAVNLDDRQIDFELVETSRKLRGQGKTAKKRADEARAKAQGKKEAATKGACGK 771
           D VKVKV+ V++  +++   +  +     G+     + A       Q +  A  K +   
Sbjct: 697 DVVKVKVMEVDIPRKRVGLSMRMSDTP--GEKVDGARGARPGSTPRQTQNTAPRKESATA 754

Query: 772 SPTKSEL 778
           +PT + +
Sbjct: 755 APTNNAM 761