Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 781 a.a., ribonuclease R from Synechocystis sp000284455 PCC 6803

 Score =  209 bits (531), Expect = 6e-58
 Identities = 189/724 (26%), Positives = 323/724 (44%), Gaps = 35/724 (4%)

Query: 44  LFEALKLEGEEQYEGLRRRLRAMERDGQLVFTRRQCYALPEKLEMVKGYVIGHKDGHGWV 103
           L + L  E  E  E L+  L A+E+ G LV  R + Y    + ++V+  +     G  + 
Sbjct: 23  LEKKLGCESPEAIEALQIALDALEKMGVLVKERGK-YKRVTREDVVEARLRCSSKGFCFA 81

Query: 104 RPEGSLNKEGDILLPHHQMRTLIHGDFVLVQ--PSGTDKRGRKEGRLVRILEERNGQIVG 161
             +       DI +    +    +GD VLV+    GT +R   EG +  IL+  N  ++ 
Sbjct: 82  IQDDE--DATDIYVREGNLSNAWNGDRVLVKVIKDGT-RRKSPEGAVHLILDRANPSLLA 138

Query: 162 RFFFEYGYSYVVPDDSRIHHDI-LIPNDLRAGARMGNVVVIEITDRGTRNRGMMGKVVEV 220
           +          VP D R+  ++ L   +   G  + ++V + +          +G+V +V
Sbjct: 139 QVKKSEDNYRAVPLDDRLLFELELQDKEQNLGEAVDHLVHVSVLRYPIAQHPPLGEVTKV 198

Query: 221 LGENMAPGMETQIAIRTHQIPHEWPAEVEQQVAGLTEEVPEEAKQGRVDLRALPLVTI-D 279
           LG +     +T I    H +P  W  E  + +  L + +     + R D R L LVT  D
Sbjct: 199 LGSDAEAAADTDIVSCKHDLPLGWTPEAIEALQSLPKVIEPGELKKRQDYRKLQLVTFGD 258

Query: 280 GE--DARDFDDAVYCEAKKGGGWRLWVAIADVSYYVRPDTALDKEAINRGNSVYFPSQVV 337
           G   +   + +       +   W++ + I D+++Y+  D+ LD+ A  RG +VY   Q+ 
Sbjct: 259 GPRGETLPWQEVALSLESQANQWQVGIHITDIAHYIAEDSLLDQLARKRGTTVYLEEQIC 318

Query: 338 PMLPEVLSNGLCSLNPQVDRLCMVCEMTVSETGKLSGYKHYEAVMNSHARLTYTKVHEIL 397
           P+ PE L  G CSL P  DRL +   +TV + G+++G++++ +V+    +L +++V   L
Sbjct: 319 PLFPEGLI-GRCSLIPDEDRLALSFFLTVDDRGEVTGFEYHSSVVKVDHQLDFSEVQTAL 377

Query: 398 EGDEELRERYKALVPHLEELH-KMYQVLKSARDERGAIEFETVETKFIFNAQRKIESIEP 456
              E +    K     L+EL  ++  ++KS R +RG+   +T ET      + ++  I  
Sbjct: 378 ADIESVSGELKPYGGLLQELFFQICPLIKSQRLQRGSFNLQT-ETASPRLDEGRLGVIMT 436

Query: 457 VVRNDAHKLIEECMILANIASASLVEKAKEAALYRVHEPPGEERLTGFRDFLGELGLDLS 516
                   L+ E M++     A  ++      LY     P  E LT        L L + 
Sbjct: 437 QETLPIRSLLAELMVVLQREVALQLQALGIPGLYCGQVAPEAEDLTDIVKLAENLDLGVK 496

Query: 517 GGLEPS--PTDYANLMKQIGERPDKELIQTMLLRSMKQAVYNADNAGHFGLALKR-YAHF 573
             LE    P  Y +L +     P K ++  +L  ++K   Y +  A HF LA    Y H 
Sbjct: 497 IDLEGDIIPQHYHHLSQAFESLPAKAVLNHLLANTLKIEKYFSHPAPHFALAYDSGYTHC 556

Query: 574 TSPIRRYPDLLLHRAIKYLIAKQEGR-----------------NQDRWTPTGGYHYSFDD 616
            SP +RY DL++ R +K ++ +   R                 NQ  W           +
Sbjct: 557 VSPAQRYGDLVIQRLLKLVLTEGRDRRTKQMKTGVELNAHTCRNQISWNVLPPNLQETIE 616

Query: 617 MDFYGEQCSMTERR--ADDATREVSDWLKCEYMQDHVGEELEGVVANVTSFGFFVRLTEL 674
            D +     + +R   A+DA +++    K E M+   GE   G++  V S+GFFV++ +L
Sbjct: 617 GDLHQLVLGLNDREQTAEDAEKDLLGLKKAEKMKARTGEIFRGLITGVQSYGFFVQIFDL 676

Query: 675 HIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLGDAVKVKVLAVNLDDRQIDFELVE 734
             +GLVH+S+L +D+Y +      LVG      YRLG+ V V+V +V+   +QID   V 
Sbjct: 677 LAEGLVHVSSLKDDWYEFRSRQCALVGRKSRTSYRLGNEVDVQVRSVDYYRQQIDLGAVN 736

Query: 735 TSRK 738
            + K
Sbjct: 737 NAPK 740