Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., putative ribonuclease II from Synechococcus elongatus PCC 7942

 Score = 68.9 bits (167), Expect = 6e-16
 Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 50/320 (15%)

Query: 275 LVTIDGEDARDFDDAVYCEAKKGGGWR--LWVAIADVSYYVRPDTALDK-EAINRGNSVY 331
           ++TIDG  + D DD V+ E     G R  L +AIA V+  + P   +++  A+ R  SVY
Sbjct: 4   VLTIDGPSSLDLDDGVWAEPVDEQGDRICLTIAIAGVATAL-PHLGIEECVALARLQSVY 62

Query: 332 FPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSETGKLSGYKHYEAVMNSHARLTYT 391
             +Q+V  +         SL P   R  +  +  +S  G++   + +E  + S A+L+Y 
Sbjct: 63  QGTQMVRAMLSPERTEALSLLPGGPRPVVCLQALISRRGEVLFSEFWETEVESVAKLSYE 122

Query: 392 KVHEILEG--DEELRERYKALVPHLEELHKMYQVLKSARDERGAIEFETVETKFIFNAQR 449
           +V+ +L G  D ELRE  + L      L K  + L   R  +G  EF             
Sbjct: 123 QVNGVLAGKEDHELREVLRWLAIAAGRLDKNRRGLWG-RSRQG--EFR------------ 167

Query: 450 KIESIEPVVRNDAHKLIEECMILANIASASLVEKAKEAALYRVHEPPGEERLTGFRDFLG 509
             + +  V+   A +LI    I  N  +   ++++   AL+RV +P  +E +        
Sbjct: 168 --DDLGSVITGKAEQLIASTAIFYNQMAGEKLKQSGFPALFRVQDPRQDEAI-------- 217

Query: 510 ELGLDLSGGLEPSPTDYANLMKQIGERPDKELIQTMLLRSMKQAVYNADNAGHFGLALKR 569
                            A L ++ G  P   ++  ++   + +A +      H+ L L  
Sbjct: 218 -----------------APLFEEHGGNPT--VLAPLISHCLPRAQHRVKAGLHWALQLPA 258

Query: 570 YAHFTSPIRRYPDLLLHRAI 589
           YA  +SP+RRY DL+  R +
Sbjct: 259 YARSSSPLRRYEDLVNQRQL 278