Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 670 a.a., Exoribonuclease II from Synechococcus elongatus PCC 7942

 Score =  109 bits (273), Expect = 4e-28
 Identities = 96/356 (26%), Positives = 146/356 (41%), Gaps = 37/356 (10%)

Query: 235 IRTHQIPHEWPAEVEQQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEA 294
           +R  Q+P  +P  V   V    +  P + +  R DL  L + TID E  R+ DD + C+ 
Sbjct: 233 LRRSQVPTTFPVAVMDVVQTCLDAPPVD-RDRRQDLSHLKVYTIDDESTREIDDGLSCQR 291

Query: 295 KKGGGWRLWVAIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQ 354
              G  +LWV +AD +  + P  ALD EA  R  ++Y P+ +VPM P  L+ G  SL   
Sbjct: 292 LSDGRLQLWVHVADPTRLIEPGDALDLEARRRSTTIYLPTGMVPMFPLELAAGPMSLVQG 351

Query: 355 VDRLCMVCEMTVSETGKLSGYKHYEAVMNSHARLTYTKVHEILEGDEELRERYKALVPHL 414
                +   + + E G ++ Y+   + +    RLTY  V E+L+      +        L
Sbjct: 352 QACCALSFGICLDEQGAIASYEIVPSQIRPTYRLTYEDVDEMLDLGVTAEQ-------EL 404

Query: 415 EELHKMYQVLKSARDERGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILAN 474
            +L +M Q  +  R ++GAI     E     +      SI  +  + A  L+ E MILA 
Sbjct: 405 LDLWEMAQRRRRWRHQQGAIAINMPEAVIKVSEADDQISISVLEESAARALVAEMMILAG 464

Query: 475 IASASLVEKAKEAALYRVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIG 534
                                     + G       L L   G  +P       L+    
Sbjct: 465 -------------------------EVAGHYGATNGLPLPFRGQPQPELPSEEELL---- 495

Query: 535 ERPDKELIQTMLLRSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIK 590
             P   +    + R M ++  + +   H  L L RY+  TSPIRRY DL+ H  IK
Sbjct: 496 ALPAGPVRSCAIRRCMPRSETSLNPQRHASLGLDRYSQVTSPIRRYTDLVTHFQIK 551