Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 842 a.a., ribonuclease R (NCBI) from Rhodospirillum rubrum S1H

 Score =  391 bits (1004), Expect = e-112
 Identities = 287/808 (35%), Positives = 407/808 (50%), Gaps = 64/808 (7%)

Query: 21  PIPSREYILEFLTQANVPMNRNDLFEALKLEGEEQYEGLRRRLRAMERDGQLVFTRRQCY 80
           P PSRE +LEF+  AN  ++R ++  A  + G E+ + LR  L+ +E +G L   R +  
Sbjct: 55  PFPSREQVLEFIRAANGEVDRREIARAFHITGPERAD-LRTLLKELESEGALQRGRGRRI 113

Query: 81  ALPEKLEMVKGYVIGHKDGHG--WVRPEGSLNKEGD--ILL---PHHQMRTLIH-----G 128
           A P  L  V   ++   D  G  + +PE     E    ILL   PHH  R  +      G
Sbjct: 114 APPGSLPEVAVLIVARADAEGDLFCKPEHWPEDEEPPRILLWPEPHHARRPGVGAEIGVG 173

Query: 129 DFVLVQPSGTDKRGRKEGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIHHDILIPND 188
           D +L + +      R + R +R L     +++G          + P + R   + L+  +
Sbjct: 174 DRILARLTRIGD-ARYDARTIRRLAAAPSRLLGVLALARDGLRLRPTNRRDRDEYLVAPE 232

Query: 189 LRAGARMGNVVVIEITDRGTRNRGMM-GKVVEVLGENMAPGMETQIAIRTHQIPHEWPAE 247
              GA  G +V  E+    +R  G+   KV+E LG    P   + + + +H IP ++P E
Sbjct: 233 DAGGAEPGELVEAELLP--SRRLGLRRAKVIERLGGREGPRSISLVVVHSHDIPVDFPPE 290

Query: 248 VEQQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAKKG----GGWRLW 303
              +     E       +GR DLRA+PLVTIDGEDARDFDDAV+ E        GGWR  
Sbjct: 291 ALAEA----EAAVGVDLRGREDLRAVPLVTIDGEDARDFDDAVFAEPDDDPANPGGWRAL 346

Query: 304 VAIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCE 363
           VAIADV++YVR   ALDK A  RGNSVYFP +VVPMLPE LSNG CSL P  DR C+   
Sbjct: 347 VAIADVAHYVRIGAALDKAARERGNSVYFPDRVVPMLPEALSNGWCSLRPNEDRGCLAVW 406

Query: 364 MTVSETGKLSGYKHYEAVMNSHARLTYTKVHEILEGDEE-----LRERYKALVPHLEELH 418
           M     G    ++    +M S ARLTYT+V    +G  +     L+ER  A       L+
Sbjct: 407 MIFDAEGNKLRHRFLRGLMRSAARLTYTQVQAARDGHADDLTAPLQERVIA------PLY 460

Query: 419 KMYQVLKSARDERGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILANIASA 478
            ++Q L  AR  RG +E +  E K + +   ++  IEP +R D+HKLIEE MI AN+++A
Sbjct: 461 GVFQALLGARSRRGTLELDLPERKVVLDDGGEVARIEPRLRFDSHKLIEELMIAANVSAA 520

Query: 479 SLVEKAKEAALYRVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGERPD 538
             +E+ +   +YRVH+ P  ++L    +FL  L +    G       +  ++K     P 
Sbjct: 521 ETLEEKRRPCMYRVHDQPAPDKLVALGEFLESLDIPFHKGSINRSGQFNGVLKAARGTPH 580

Query: 539 KELIQTMLLRSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLIAKQEG 598
           + ++  ++LRS  QA Y+ DN GHFGLAL+RYAHFTSPIRRY DLL+HRA   LIA   G
Sbjct: 581 EHMVNEVVLRSQAQAEYSPDNIGHFGLALRRYAHFTSPIRRYADLLVHRA---LIAGL-G 636

Query: 599 RNQDRWTPTGGYHYSFDDMDFYGEQCSMTERRADDATREVSDWLKCEYMQDHVGEELEGV 658
              D   P      + +D        + TERRA  A R+  +     ++   VG    G 
Sbjct: 637 LGDDGLRPG-----AEEDFVETAAHITATERRAAQAERDAVNRYTVSFLAAKVGATFAGR 691

Query: 659 VANVTSFGFFVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLGDAVKVKV 718
           +  VT  G FV L +   DGL+ I +L NDYY +D     L G+  G  + LG  V+V +
Sbjct: 692 INGVTRAGLFVTLEDTGADGLIPIGSLPNDYYVHDDAHHCLRGQRDGLEFHLGAPVEVLL 751

Query: 719 LAVNLDDRQIDFELVE-----------TSRKLRGQ---GKT-AKKRADEARAK--AQGKK 761
              N     + F L++            S K +G+   GKT  K+R   A+ K  A+GK 
Sbjct: 752 REANPVSGGLVFGLLQGGVAGAAKGRGFSGKTKGRDGLGKTRLKERGAAAKLKKGARGKP 811

Query: 762 EAATKGACGKSPTKS--ELKPQVEATRR 787
           +AA + A    P  S  + +P    +RR
Sbjct: 812 KAAGRDALAGEPVGSGPKKRPPTTTSRR 839