Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 787 a.a., RNA-binding S1 domain-containing protein (RefSeq) from Shewanella loihica PV-4

 Score = 62.4 bits (150), Expect = 1e-13
 Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 21/135 (15%)

Query: 655 LEGVVANVTSFGFFVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLGDAV 714
           LEGVV NVT+FG FV +  +H DGLVHIS+L  D +  DP            + + GD V
Sbjct: 655 LEGVVTNVTNFGAFVDI-GVHQDGLVHISSL-TDKFVSDP----------HTVVKAGDVV 702

Query: 715 KVKVLAVNLDDRQIDFELVETSRKLRGQGKTAKKRADEARAKAQGKKEAATKGACGKSPT 774
           KVKV+ V+ + ++I       S  +R   K  +K+      K Q  K    KG  GKSP 
Sbjct: 703 KVKVMEVDAERKRI-------SLTMRLDEKPGEKQMSHQGGKGQA-KAGQGKGHQGKSPQ 754

Query: 775 -KSELKPQVEATRRP 788
            KS+ K Q +  + P
Sbjct: 755 GKSQAKGQYKQPKAP 769