Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 828 a.a., ribonuclease R from Dechlorosoma suillum PS

 Score =  726 bits (1873), Expect = 0.0
 Identities = 394/830 (47%), Positives = 540/830 (65%), Gaps = 45/830 (5%)

Query: 1   MSDTTHLDPFADREADNYDNPIPSREYILEFLTQANVPMNRNDLFEALKLEGEEQYEGLR 60
           +S T   DPF +RE   Y+ P+PSREY ++ L     P++ + L   L +  +E+ +  +
Sbjct: 6   LSKTRKNDPFFERECQKYEIPLPSREYTMQLLQDQGRPVSFDQLVALLDISRDEE-DLFQ 64

Query: 61  RRLRAMERDGQLVFTRRQCYALPEKLEMVKGYVIGHKDGHGWVRPEGSLNKEGDILLPHH 120
           RRL AMERDGQL+  R+  Y LPEK +++ G V GH DG G+V+P+   +   D+ L   
Sbjct: 65  RRLNAMERDGQLLRNRKNSYILPEKADLIPGKVEGHPDGFGFVKPDDGSD---DLFLEPK 121

Query: 121 QMRTLIHGDFVLVQPSGTDKRGRKEGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIH 180
           QM  ++HGD VLV+  G D+RGR+E  +V +LE  N ++VGR   E+G  +VV ++ RI 
Sbjct: 122 QMDKVLHGDRVLVRCIGLDRRGRREATIVEVLERANTRLVGRLMEEHGIQFVVAENKRIS 181

Query: 181 HDILIP----NDLRAG--ARMGNVVVIEITDRGTRNRGMMGKVVEVLGENMAPGMETQIA 234
            DILIP     D RA   AR GNVV++EI ++ +R    +G++VE+LG    PGME +IA
Sbjct: 182 QDILIPPTAMTDKRAKLKARPGNVVMVEILEQPSRYSQPIGRIVEILGNYADPGMEIEIA 241

Query: 235 IRTHQIPHEWPAEVEQQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEA 294
           +R H +P E+  E + +   + ++V +   +GR DLR LPLVTIDGE ARDFDDAV+CE 
Sbjct: 242 LRKHDLPFEFSKEAQAENKAVPDKVKKSDFKGREDLRELPLVTIDGETARDFDDAVFCE- 300

Query: 295 KKGGGWRLWVAIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQ 354
           K G GWRL VAIADVS+YVRP  ALD+EA +RGNSVYFP +V+PMLPE LSNG+CSLNP 
Sbjct: 301 KVGRGWRLVVAIADVSHYVRPGMALDQEAYDRGNSVYFPRRVIPMLPEKLSNGICSLNPD 360

Query: 355 VDRLCMVCEMTVSETGKLSGYKHYEAVMNSHARLTYTKVHEILEGDEELR-ERYKALVPH 413
           V+RL MVC+M +S TG +  Y+ Y AV  SHARLTY +V   L G  +   E ++AL PH
Sbjct: 361 VERLAMVCDMNISATGSIGKYRFYPAVFRSHARLTYNQVWGWLSGQSQPENEVHQALQPH 420

Query: 414 LEELHKMYQVLKSARDERGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILA 473
           L+ L+K++QVL  AR +RGAI+FETVET+ +FNAQ KIE+I PVVRNDAH+LIEECM+ A
Sbjct: 421 LQNLYKLFQVLLKARKKRGAIDFETVETQMLFNAQGKIENIVPVVRNDAHRLIEECMLAA 480

Query: 474 NIASASLVEKAKEAALYRVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQI 533
           N+ ++  + + K+A LYRVH+ P  E+L   R FLGE G  L+GG EP   DYA L+++I
Sbjct: 481 NVCASGFLHEHKQACLYRVHQGPTPEKLENLRAFLGEFGFSLAGGDEPKAKDYAELLEKI 540

Query: 534 GERPDKELIQTMLLRSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLI 593
             RPD +L+QT++LRS++QA Y  +N GHFGLA + Y HFTSPIRRYPDLL+HRAIK ++
Sbjct: 541 QGRPDTQLLQTVMLRSLRQAQYAPENLGHFGLAYEAYTHFTSPIRRYPDLLVHRAIKAVL 600

Query: 594 AKQEGRNQDRWTPTGGYHYSFDDMDFYGEQCSMTERRADDATREVSDWLKCEYMQDHVGE 653
           A  E  N  +W             +  G  CS TERRAD+ATR+V +WLKC YM++ +GE
Sbjct: 601 A-GETYNPGKW-------------EDIGLHCSGTERRADEATRDVDNWLKCFYMKERIGE 646

Query: 654 ELEGVVANVTSFGFFVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLGDA 713
           E EG +A V +FG FV L E+ ++G+VH+S L  DY+H++P   +++GE  G  +RLGD 
Sbjct: 647 EFEGTIAGVAAFGIFVALDEVFVEGMVHVSELGEDYFHFEPAKHQMLGERSGKRFRLGDR 706

Query: 714 VKVKVLAVNLDDRQIDFELVETSRK--------LRGQGKTAKKRADEARAKAQGKKEAAT 765
           ++VK++  +L+  +IDF L +  ++        +  +  T  K A  A A  QGK  A  
Sbjct: 707 LRVKLVRADLESGRIDFILAQEKKEGPAGDDEVVTWRKNTTGKPALGA-AAPQGKPRA-- 763

Query: 766 KGACGKSPTKSELKPQVEATRRPDSEGRSKPKKTKAPKKRKDQARKKSGK 815
            G+ G  P KS    +     +    G       K+P   K  A K+SGK
Sbjct: 764 -GSGGGKPGKSAPGGKAGGPGQGGHRG-------KSPAAAKTGAPKRSGK 805