Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 637 a.a., exoribonuclease R from Dechlorosoma suillum PS

 Score = 56.6 bits (135), Expect = 4e-12
 Identities = 61/247 (24%), Positives = 107/247 (43%), Gaps = 22/247 (8%)

Query: 270 LRALPLVTIDGEDARDFDDAVYCEAKKGGGWRLWVAIADVSYYVRPDTALDKEAINRGNS 329
           L ++   +ID     + DDA   EA  G GWR+ + IA       P  ALD+ A +R ++
Sbjct: 238 LASVQAFSIDDAATTEIDDAFSLEALPGIGWRVGIHIAAPGLGFGPGEALDQIARDRLST 297

Query: 330 VYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSETGKLSGYKHYEAVMNSHARLT 389
           VY P   + MLP+ +     +L     R  +   +TV+E  ++ G++     ++  A L 
Sbjct: 298 VYMPGNKITMLPDAVVEAY-TLAEGKPRPAVSLYLTVNEGLEIVGHESRLERVHVAANLR 356

Query: 390 YTKVHEILEGDEELRERYKALVPHLEELHKMYQVLKSARDERGAIEFETVETKFIFN--- 446
           + ++  +   +E             +EL  ++Q+  +    RG    +   T+ IF+   
Sbjct: 357 HHEIEPLF--NEATLAAGLGDFRFAQELKLLWQLACACEGRRG----KPSATQGIFDYNF 410

Query: 447 -----------AQRKIESIEPVVRNDAHKLIEECMILANIASASLVEKAKEAALYRVHEP 495
                      A  +IE       +   KL+ E MI+AN     L+ + K A +YR  + 
Sbjct: 411 DVFPDASDPTGAADRIEISARKRGSPLDKLVAELMIVANATWGGLLAEKKVACIYRA-QT 469

Query: 496 PGEERLT 502
            G+ R+T
Sbjct: 470 AGKVRMT 476



 Score = 30.4 bits (67), Expect = 3e-04
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 11/50 (22%)

Query: 546 LLRSMKQA-VYNADNAG----------HFGLALKRYAHFTSPIRRYPDLL 584
           LL   K A +Y A  AG          H GL + +YA  +SP+RRY DL+
Sbjct: 455 LLAEKKVACIYRAQTAGKVRMTTSPLPHEGLGVPQYAWSSSPLRRYVDLV 504