Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 735 a.a., ribonuclease II (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  104 bits (260), Expect = 2e-26
 Identities = 99/401 (24%), Positives = 158/401 (39%), Gaps = 79/401 (19%)

Query: 244 WPAEVEQQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAKKGGGWRLW 303
           W A     +A L   V    +  R +    P ++ID    RD DDA + EA+  GG+RLW
Sbjct: 270 WAAGHADDIAALRAAV----ESARREPLGTPFISIDSATTRDIDDAFHIEARGDGGFRLW 325

Query: 304 VAIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCE 363
           +A+A  +      + LDK  + R  S+Y P     MLPE L  G  SL    DR  +V  
Sbjct: 326 LALACPALAWPYGSELDKAVLRRATSIYLPEATHHMLPEELGTGFFSLLAGQDRPALVLA 385

Query: 364 MTVSETGKLSGYKHYEAVMNSHARLTYTKVHEILEG----------DEELRERY------ 407
           M V+  G+L       A +N  A LTY      L            D++L          
Sbjct: 386 MEVAPDGELQSCVPGGAWVNLAANLTYEACEACLAAVAPPQAAPNPDDDLLAAMLAGAPD 445

Query: 408 -----------------KALVPHLEEL---HKMYQVLKSARDERGAIEFETVETKFIFNA 447
                             A  PH + L    ++ + L+S R  RGA+  E  + K   + 
Sbjct: 446 AEDAASAPTAAPIPLPDNAAAPHADRLAVADRLARALQSHRIGRGAVIIERDDPKVTLSG 505

Query: 448 QRK---IESIEPVVRNDAHKLIEECMILANIASASLVEKAKEAALYRVHEPPGEERLTGF 504
           +     ++  E      +  ++ E MILAN   A    + + A L+R             
Sbjct: 506 EGSATVVDIAEQPTTPRSQSIVAEMMILANAGVARWAGENRVALLHRTQ----------- 554

Query: 505 RDFLGELGLDLSGGLEPSPTDYANLMKQIGERPDKELIQTMLLRSMKQAVYNADNAGHFG 564
                ++G+         P +YA + +   E          +++++  ++       H G
Sbjct: 555 -----DVGI---------PREYAGVWRAPHE-------VARVVKALASSLLETSPRPHAG 593

Query: 565 LALKRYAHFTSPIRRYPDLLLHRAIKYLIAKQEGRNQDRWT 605
           + +  Y+  TSP+RRYPDL+    + + +A  +G    RWT
Sbjct: 594 IGVPAYSPVTSPLRRYPDLINETQVLHALATGQG----RWT 630