Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 815 a.a., exoribonuclease R from Klebsiella michiganensis M5al

 Score = 1019 bits (2634), Expect = 0.0
 Identities = 509/814 (62%), Positives = 626/814 (76%), Gaps = 20/814 (2%)

Query: 8   DPFADREADNYDNPIPSREYILEFLTQANVPMNRNDLFEALKLEGEEQYEGLRRRLRAME 67
           DPF DRE++ Y NPIPSRE+IL+ L +   P +R++L   L +EGEEQ E LRRRLRAME
Sbjct: 4   DPFLDRESEKYANPIPSREFILDHLAKREKPASRDELATELNIEGEEQQEALRRRLRAME 63

Query: 68  RDGQLVFTRRQCYALPEKLEMVKGYVIGHKDGHGWVRPEGSLNKEGDILLPHHQMRTLIH 127
           RDGQLVFTRRQCYALPE+L+++KG VIGH+DG+G++R EG   ++ D+ L   QM+T IH
Sbjct: 64  RDGQLVFTRRQCYALPERLDLLKGIVIGHRDGYGFLRVEG---RKDDLYLSSEQMKTCIH 120

Query: 128 GDFVLVQPSGTDKRGRKEGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIHHDILIPN 187
           GD VL QP G D++GR+E R+VR+L  + GQIVGR+F + G  +VVPDDSR+  DILIP 
Sbjct: 121 GDQVLAQPLGADRKGRREARIVRVLVPKTGQIVGRYFTDAGVGFVVPDDSRLSFDILIPP 180

Query: 188 DLRAGARMGNVVVIEITDRGTRNRGMMGKVVEVLGENMAPGMETQIAIRTHQIPHEWPAE 247
           +   GARMG VVV+E+T R TR    +GK+VEVLG+NM  GM   +A+RTH+IP+ WP  
Sbjct: 181 EQIMGARMGFVVVVELTQRPTRRTKAIGKIVEVLGDNMGTGMAVDMALRTHEIPYVWPPA 240

Query: 248 VEQQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAKKGGGWRLWVAIA 307
           VE+QVAGL E+VPEEAK+GRVDLR+LPLVTIDGEDARDFDDAVYCE K+GGGWRLWVAIA
Sbjct: 241 VEKQVAGLKEQVPEEAKKGRVDLRSLPLVTIDGEDARDFDDAVYCEKKRGGGWRLWVAIA 300

Query: 308 DVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVS 367
           DVSYYVRP T LD EA +RG SVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMT+S
Sbjct: 301 DVSYYVRPGTPLDGEARSRGTSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTIS 360

Query: 368 ETGKLSGYKHYEAVMNSHARLTYTKVHEILEGDEELRERYKALVPHLEELHKMYQVLKSA 427
             G+L+G+K YEAVM+SHARLTYTKV  +L+GD++LRE+Y  LV H+EELH +Y+VL  A
Sbjct: 361 AKGRLTGFKFYEAVMSSHARLTYTKVWHMLQGDQDLREQYAPLVKHIEELHNLYKVLDGA 420

Query: 428 RDERGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILANIASASLVEKAKEA 487
           R+ERG I FE+ E KFIFNA+R+IE IE   RNDAHKLIEECMILANI++A  VEKA+E 
Sbjct: 421 REERGGISFESEEAKFIFNAERRIERIEQTQRNDAHKLIEECMILANISAARFVEKAEEP 480

Query: 488 ALYRVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGERPDKELIQTMLL 547
           AL+R+H+ P  E +T FR  L ELGL+L GG +P P DYA L+  I +RPD E++QTMLL
Sbjct: 481 ALFRIHDKPSTEAITAFRSVLAELGLELPGGNKPEPRDYAELLTSIADRPDAEMLQTMLL 540

Query: 548 RSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLIAKQEGRNQDRWTPT 607
           RSMKQA+Y+ +N GHFGLAL+ YAHFTSPIRRYPDL LHRAIKYL+AK++G ++   T T
Sbjct: 541 RSMKQAIYDPENRGHFGLALQSYAHFTSPIRRYPDLSLHRAIKYLLAKEQG-HKGNSTET 599

Query: 608 GGYHYSFDDMDFYGEQCSMTERRADDATREVSDWLKCEYMQDHVGEELEGVVANVTSFGF 667
           GG+HYS D+M   G  CSMTERRAD+ATR+VSDWLKC++M D VG   +GV+A+VT FGF
Sbjct: 600 GGWHYSMDEMLQLGAHCSMTERRADEATRDVSDWLKCDFMLDQVGNVFKGVIASVTGFGF 659

Query: 668 FVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLGDAVKVKVLAVNLDDRQ 727
           FVRL EL IDGLVH+S+L NDYY +D +GQRL+GES G  YRLGD V+V+V AVN+D+R+
Sbjct: 660 FVRLDELFIDGLVHVSSLDNDYYRFDQVGQRLIGESGGQTYRLGDRVEVRVEAVNMDERK 719

Query: 728 IDFELVETSRKLRGQGKTAKKRADEARAKAQGKKEAATKGACGKSPTKSELKPQVEATRR 787
           IDF L+ + R  R  GKT              ++E A KGA GKS  +   +   +    
Sbjct: 720 IDFSLISSERAPRNVGKT--------------EREKAKKGAGGKSSGRRR-QAGKQVNFE 764

Query: 788 PDSEGRSKPKKTKAPKKRKDQARKKSGKVRDKTK 821
           PDS  R K K    PK  + +  KK+ K  +KT+
Sbjct: 765 PDSAFR-KQKGQSQPKSAQPKGEKKAKKPSEKTQ 797