Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 644 a.a., Exoribonuclease 2 from Enterobacter sp. TBS_079

 Score =  161 bits (408), Expect = 9e-44
 Identities = 169/686 (24%), Positives = 294/686 (42%), Gaps = 71/686 (10%)

Query: 66  MERDGQLVFTRRQCYALPEKLEMVKGYVIGHKDGHGWVRPEGSLNKEGDILLPHHQMRTL 125
           M +D  L+   +Q   L  +    +G V   + G G++     ++ +    +P  QM+ +
Sbjct: 1   MFQDNPLLAQLKQ--QLHSQTPRAEGVVKATEKGFGFLE----VDAQKSYFIPPPQMKKV 54

Query: 126 IHGDFVLVQPSGTDKRGRKEGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIHHDIL- 184
           +HGD +      T+K  R+      ++E    + VG+   +     +VPD     H +L 
Sbjct: 55  MHGDRITAVIH-TEKE-RESAEPEELIEPFLTRFVGKVQRKDDRLSIVPD-----HPLLK 107

Query: 185 --IPNDLRAGA----RMGNVVVIEITDRGTR-NRGMMGKVVEVLGENMAPGMETQIAIRT 237
             IP     G     + G+  V E+     + +RG   ++ + +       +   + +  
Sbjct: 108 DAIPCRAARGVEHDFKEGDWAVAEMRRHPLKGDRGFYAELTQFITFGDDHFVPWWVTLAR 167

Query: 238 HQIPHEWPAEV--EQQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAK 295
           H +  E P  V  E Q  GLT          R DL AL  VTID     D DDA+Y E  
Sbjct: 168 HNLEKEAPDGVATEMQDEGLT----------RRDLTALEFVTIDSASTEDMDDALYAEES 217

Query: 296 KGGGWRLWVAIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQV 355
             G   L VAIAD + ++   + LD  A  R  + Y P   +PMLP  LS+ LCSL P  
Sbjct: 218 ADGKVHLTVAIADPTAWIVEGSKLDDMAKVRSFTNYLPGFNIPMLPRELSDDLCSLRPNE 277

Query: 356 DRLCMVCEMTVSETGKL-SGYKHYEAVMNSHARLTYTKVHEILEGDEELRERYKALVPHL 414
            R  + C MT++  G +    + + A + S A+L Y  V + LE     +    A+   +
Sbjct: 278 VRPVLACRMTIAADGAIEDDIEFFAATIESKAKLAYDNVSDWLENTGTWKPDSDAIAAQI 337

Query: 415 EELHKMYQVLKSARDERGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILAN 474
             LH++       R     +  +  + +F+   + ++ +I    R  A++++EE MI AN
Sbjct: 338 RLLHRICLNRGEWRKTHALVFKDRPDYRFVLGEKGEVLNIVAEPRRIANRIVEEAMISAN 397

Query: 475 IASASLVEKAKEAALYRVH---EPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMK 531
           I +A ++       +Y VH   +P   E L      L    + +      +   +  L +
Sbjct: 398 ICAARVLRDKLGFGIYNVHTGFDPANTEALAA---LLKNHDVHVDPEEVLTLQGFCKLRR 454

Query: 532 QIGERPDKELIQTMLLRSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKY 591
           ++  +P    + + + R    A  + +   HFGL L+ YA +TSPIR+Y D++ HR +K 
Sbjct: 455 ELDAQP-SGFLDSRIRRFQSFAEISTEPGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKA 513

Query: 592 LIAKQE-GRNQDRWTPTGGYHYSFDDMDFYGEQCSMTERRADD--ATREVSDWLKCEYMQ 648
           +I  +   R Q+  T                    M ERR  +  A R+V DWL   Y+Q
Sbjct: 514 IIKGESIARPQNDTT------------------LQMAERRRLNRMAERDVGDWLYARYLQ 555

Query: 649 DHVGEE--LEGVVANVTSFGFFVRLTELHIDGLV---HISTLANDYYHYDPIGQ-RLVGE 702
           D  G +      + +++  G  VRL +      +    +  + ++       G  ++ GE
Sbjct: 556 DKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDELVCSQENGTVQIKGE 615

Query: 703 SFGAIYRLGDAVKVKVLAVNLDDRQI 728
           +   +Y++ D + V +  V ++ R +
Sbjct: 616 T---VYKVTDVIDVNIAEVRMETRSV 638