Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 698 a.a., RNB-like family protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 84.3 bits (207), Expect = 2e-20
 Identities = 86/348 (24%), Positives = 136/348 (39%), Gaps = 46/348 (13%)

Query: 243 EWPAEVEQQVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAKKGGGWRL 302
           EW  +   ++  L + V E  ++  VD      ++ID    RD DDA        GGW L
Sbjct: 269 EWAIDHVDEIDALMKRV-EALREPLVDGT---FISIDSSTTRDIDDAFDISPSPEGGWIL 324

Query: 303 WVAIADVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVC 362
            + +A        D  LD+  + R  S+Y P +   M+PE L     SL    DR  ++ 
Sbjct: 325 RLVLASPVTGWDFDGPLDRAVLRRATSIYLPERSHHMMPETLGTDAYSLLAGQDRPALLV 384

Query: 363 EMTVSETGKLSGYKHYEAVMNSHARLTYTKVHEILEGDEELRERYKALVPHLEEL---HK 419
              ++  G L         +   A LTYT+    L G+ +         PH + L     
Sbjct: 385 TFDIAPDGSLRSTTPATGWVRLAANLTYTECEACLTGEGDAGR----AAPHADRLALADA 440

Query: 420 MYQVLKSARDERGAIEFETVETKFIFNAQR---KIESIEPVVRNDAHKLIEECMILANIA 476
           + +V +  R   GA+  E  + K     +    K+    P     A  L+ E MILAN A
Sbjct: 441 LARVRQQLRVAAGAVIIERDDPKVTLEGEGCAVKVHVAPPDETPRAQLLVSEMMILANAA 500

Query: 477 SASLVEKAKEAALYRVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGER 536
            AS   +     L+R                  ++G+         P +YA +  Q  + 
Sbjct: 501 IASWGAERGITLLHRTQ----------------DVGI---------PREYAGVWNQPHD- 534

Query: 537 PDKELIQTMLLRSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLL 584
                    +++++  A        H G+A+  Y+  TSP+RRYPDL+
Sbjct: 535 ------IARVVKALAPAHLEPVAKPHAGIAVPAYSPVTSPLRRYPDLV 576