Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 569 a.a., SSU ribosomal protein S1P from Caulobacter crescentus NA1000

 Score = 48.5 bits (114), Expect = 1e-09
 Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 12/84 (14%)

Query: 646 YMQDH-VGEELEGVVANVTSFGFFVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESF 704
           +++ H VG  +EG V N T FG FV L    IDG+VH+S           I   + GE  
Sbjct: 367 FLEAHPVGSTVEGEVKNATEFGLFVGLDN-DIDGMVHLSD----------IDWSVPGEEA 415

Query: 705 GAIYRLGDAVKVKVLAVNLDDRQI 728
            A Y+ GD VK KVL V+++  +I
Sbjct: 416 MARYKKGDMVKAKVLDVDVEKERI 439



 Score = 42.7 bits (99), Expect = 6e-08
 Identities = 32/103 (31%), Positives = 51/103 (49%), Gaps = 21/103 (20%)

Query: 626 MTERRADDATREVSDWLKCEYMQDHVGEELEGVVANVTSFGFFVRLTELHIDGLVHISTL 685
           + E RA+  T  VS        Q   GE  EGVV N+T +G FV L    IDGL+H++ +
Sbjct: 184 LEEARAEQRTELVS--------QLQEGEIREGVVKNITDYGAFVDLG--GIDGLLHVTDM 233

Query: 686 ANDYYHYDPIGQRLVGESFGAIYRLGDAVKVKVLAVNLDDRQI 728
           +    ++              +  +GD VKV+++ +N D ++I
Sbjct: 234 SWKRVNHP-----------SQVLAVGDTVKVQIVKINPDTQRI 265