Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 760 a.a., ribonuclease R from Caulobacter crescentus NA1000

 Score =  350 bits (898), Expect = e-100
 Identities = 248/756 (32%), Positives = 377/756 (49%), Gaps = 30/756 (3%)

Query: 22  IPSREYILEFLTQANVPMNRNDLFEALKLEGEEQYEGLRRRLRAMERDGQLVFTRRQCYA 81
           +P RE +L FL  A     + D+     L+G ++   LR  +R +E  G L    R+ +A
Sbjct: 18  LPDRETLLAFLRDAG-ETGKADIARHFGLKGADR-RALREMIRELEAQGALAKRGRKGFA 75

Query: 82  LPEKLEMVKGYVIGHKDGHG--WVRPEGSLNKEGDILLPHHQMRTLIH----GDFVLVQP 135
               L  V    +  +DG G  +V+   S +   ++ L   +          GD +LV+ 
Sbjct: 76  EAGSLPPVGVADVVERDGDGELYVKLTKSDDDVPNVRLAPGKGEAAAGAPGLGDRLLVRF 135

Query: 136 SGTDKRGRKEGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIHHDILIPNDLRAGARM 195
              +  G  E +L++ L +   +I+G          V P D +    +++   +    + 
Sbjct: 136 ERLET-GEFEAKLIKKLGQSAHKILGVIRKHRREVRVEPVDRKSKESLVLDPSVAHDFKE 194

Query: 196 GNVVVIEITDRGTRNRGMMGKVVEVLGENMAPGMETQIAIRTHQIPHEWPAEVEQQVAGL 255
           G++V+ ++   G R     GKV+EV+G    P   + IAI +H IP  +    E +    
Sbjct: 195 GDLVLAQVGTHGGRYGPKPGKVLEVVGTENDPRAASLIAIHSHGIPTGFSEAAEAEA--- 251

Query: 256 TEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAKKG----GGWRLWVAIADVSY 311
            +   E    GR DLR LP VTID  DARD DDAVY    +     GG+ +WVAIADV+ 
Sbjct: 252 -KTAVEPTLAGREDLRDLPFVTIDPVDARDHDDAVYAHPDEDETNKGGFVVWVAIADVAA 310

Query: 312 YVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSETGK 371
           YVRP +ALD++A  +GNSVYFP +V PMLPE LSNGLCSL    +R  +   M   ++G+
Sbjct: 311 YVRPGSALDRDAREKGNSVYFPDRVEPMLPETLSNGLCSLRESENRATLAVRMVFDKSGR 370

Query: 372 LSGYKHYEAVMNSHARLTYTKVHEILEGDEELRERYKALVPHLEELHKMYQVLKSARDER 431
             G++    +M S A+L+Y +    ++G  + +     L P L+ L   Y+ +K  RD R
Sbjct: 371 KKGHRFVRGLMRSAAKLSYEQAQAAIDGQPDDKAG-PLLDPILKPLWDAYRTMKIGRDAR 429

Query: 432 GAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILANIASASLVEKAKEAALYR 491
             +  E+ E + I     +I SI      +AHKLIEE M+ AN+ +A  +E  +   +YR
Sbjct: 430 SPLAIESDERRIIIKGG-EITSITKRASLEAHKLIEEMMVQANVCAAESLEAKRSPLIYR 488

Query: 492 VHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGERPDKELIQTMLLRSMK 551
           VH+ P  E++    DFL  L +  S G  P    +  L+++  E P+  +I  ++LR+  
Sbjct: 489 VHDTPSLEKVQNLADFLQTLEIRWSKGEAPQTARFNKLLEETRESPNAAIINEVVLRTQM 548

Query: 552 QAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLIAKQEGRNQDRWTPTGGYH 611
           QA Y+ADN GHFGL L +YAHFTSPIRRY DL++HR     + +  G   D  T      
Sbjct: 549 QAHYSADNIGHFGLNLAKYAHFTSPIRRYADLIVHRG----LIRALGLGTDGLT-----D 599

Query: 612 YSFDDMDFYGEQCSMTERRADDATREVSDWLKCEYMQDHVGEELEGVVANVTSFGFFVRL 671
                +    E  +  ERRA  A R+ +D     ++ D VG   EG +  VT FG F++L
Sbjct: 600 QDIAQIKDTAEVITHAERRAMAAERDATDRYIAAFLADRVGATFEGRITGVTRFGLFIKL 659

Query: 672 TELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLGDAVKVKVLAVNLDDRQIDFE 731
            +   DGLV +S+L  +++ +D     LVGE  G  + LG +V+VK++        + FE
Sbjct: 660 ADTGADGLVPVSSLGQEFFVHDDKMHALVGERTGKRWPLGLSVEVKLVEATPVTGGLLFE 719

Query: 732 LVETSRKLRGQGKTAKKRADEARAKAQGKKEAATKG 767
           ++  S  L    K  + R    R  A   +    KG
Sbjct: 720 ML--SEPLPPDPKMPRPRLGARRQAAVKPRGGLPKG 753