Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 864 a.a., ribonuclease R from Ralstonia sp. UNC404CL21Col

 Score =  676 bits (1745), Expect = 0.0
 Identities = 394/862 (45%), Positives = 531/862 (61%), Gaps = 67/862 (7%)

Query: 21  PIPSREYILEFLTQANVPMNRNDLFEALKLEGEEQYEGLRRRLRAMERDGQLVFTRRQCY 80
           PIPSRE IL  L  +  P++  D+ +AL +  +E ++G  +RL AMERDGQ+   R+  Y
Sbjct: 7   PIPSREEILGVLRTSGSPLSATDIAKALSVTRKE-HDGFIKRLTAMERDGQIELNRKGRY 65

Query: 81  ALPEKLEMVKGYVIGHKDGHGW-VRPEGSLNKEGDILLPHHQMRTLIHGDFVLVQPSGTD 139
            L  +   ++G VIGH+DG G+ VR +G    E DI LP  +M+  +HGD  LV+  G D
Sbjct: 66  ELAHQPNFIEGRVIGHRDGFGFFVRDDG----EPDIFLPEREMQKAMHGDRALVRAVGYD 121

Query: 140 KRGRKEGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIHHDILIPNDLRAGARMGNVV 199
           +RGR EG++V IL+  N +++GR   E G   V P+D R+  DILI    +  A++G VV
Sbjct: 122 RRGRSEGQIVEILQRANKRVIGRLLSESGTLVVAPEDKRLGRDILIAPKGQGKAKVGQVV 181

Query: 200 VIEITDRGTRNRGMMGKVVEVLGENMAPGMETQIAIRTHQIPHEWPAEVEQQVAGLTEEV 259
            +EI +   R    +G+VVEVLGE   PGME +IA+R + +PHE+    +++   L + V
Sbjct: 182 SVEILEYPDRYVQPIGRVVEVLGEIDDPGMEIEIAVRKYGVPHEFSEPTQREAEALPDVV 241

Query: 260 PEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCEAKKGG---GWRLWVAIADVSYYVRPD 316
            +    GR+DLR +PLVTIDGEDARDFDDAVY E  K G   GWRL VAIADVS+YVRP 
Sbjct: 242 RDADLAGRIDLRDVPLVTIDGEDARDFDDAVYAEPVKIGRSKGWRLIVAIADVSHYVRPG 301

Query: 317 TALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVSETGKLSGYK 376
             LD +AI+R  SVYFP +V+PMLPE LSNGLCSLNP+VDRLCMVC+  ++  G++  Y+
Sbjct: 302 HPLDADAIDRATSVYFPRRVIPMLPEKLSNGLCSLNPEVDRLCMVCDAVITAKGEIKAYQ 361

Query: 377 HYEAVMNSHARLTYTKVHEILEGDEELRERYKA-LVPHLEELHKMYQVLKSARDERGAIE 435
            Y AVM+S ARLTY +V  IL   +      +A LVPHL+EL+++YQ L  AR ERGAI+
Sbjct: 362 FYPAVMHSKARLTYNEVWAILSNVKGPEAAKRAPLVPHLQELYELYQTLLKARRERGAID 421

Query: 436 FETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILANIASASLVEKAKEAALYRVHEP 495
           F+T ET  + NAQ KIE I P  RNDAH+LIEECM+ AN+ +A ++EK K  ALYRVH  
Sbjct: 422 FDTTETYIVCNAQGKIEQILPRTRNDAHRLIEECMLTANVCAAEMLEKYKHPALYRVHAG 481

Query: 496 PGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGERPDKELIQTMLLRSMKQAVY 555
           P EE+L   R FL   GL L GG +P   DYA LM+++  RPD  ++QTMLLRSM+QAVY
Sbjct: 482 PTEEKLQALRAFLKTSGLTLGGGDKPQAADYAELMEKVAARPDAPMLQTMLLRSMQQAVY 541

Query: 556 NADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLI---------------------- 593
           + DN GHFGLA   YAHFTSPIRRYPDLL+HR+IK ++                      
Sbjct: 542 SPDNIGHFGLAYPAYAHFTSPIRRYPDLLVHRSIKAILNRTRYVPALAPGVQLNSALSPK 601

Query: 594 AKQEGRNQDRWTPTGGYHYSFDDMDFY--GEQCSMTERRADDATREVSDWLKCEYMQDHV 651
           A++     ++  P    + +  +  ++  G  CS  ERRAD+A+R+V  WLKC +M+D +
Sbjct: 602 ARRLQAEAEKGVPAAVVNKAKVEAIWHELGVHCSANERRADEASRDVEAWLKCYFMRDKL 661

Query: 652 GEELEGVVANVTSFGFFVRLTELHIDGLVHISTLANDYYHYDPIGQRLVGESFGAIYRLG 711
           G E  G V+ VTSFG FV+L EL+++GLVH++ L +DY+ YD     L GE  G  YRL 
Sbjct: 662 GNEFSGTVSAVTSFGIFVQLDELYVEGLVHVTELGSDYFQYDEARNELRGERTGIRYRLT 721

Query: 712 DAVKVKVLAVNLDDRQIDFELVE--TSRKLRGQGKTAKKRADEAR-------AKAQGKKE 762
           D V+V++L V+LD R++DF L++  +++ LR    T    A  AR       A   G+K+
Sbjct: 722 DRVRVQLLRVDLDARKMDFRLIQEPSTKALRPAKVTGAPEAAAARQAAVATPAPPVGRKK 781

Query: 763 ----AATKGACGKSPTKS---------ELKPQVEATRR--PDSEGRSKP-KKTKAPKKRK 806
               AA  G   K P +S         E +P  E   R  P     +KP +K +A +  K
Sbjct: 782 PRQLAALLGGTAK-PEESFDETLDRVIEEQPVFEPGGRALPPGHPHAKPARKKQAARGTK 840

Query: 807 DQA-------RKKSGKVRDKTK 821
            +        RK +GK   KTK
Sbjct: 841 PKGGAKTAAPRKVAGKAPRKTK 862