Pairwise Alignments

Query, 821 a.a., ribonuclease R from Vibrio cholerae E7946 ATCC 55056

Subject, 833 a.a., ribonuclease R from Burkholderia phytofirmans PsJN

 Score =  667 bits (1721), Expect = 0.0
 Identities = 381/836 (45%), Positives = 515/836 (61%), Gaps = 46/836 (5%)

Query: 12  DREADNYDNPIPSREYILEFLTQANVPMNRNDLFEALKLEGEEQYEGLRRRLRAMERDGQ 71
           D+    +  PIPSRE IL  L  +  P+  ND+ EAL ++ +E+ EG  +RL AMERDGQ
Sbjct: 8   DKPLSKFPYPIPSREEILGVLRTSEAPLAANDIAEALSIKRQER-EGFFKRLGAMERDGQ 66

Query: 72  LVFTRRQCYALPEKLEMVKGYVIGHKDGHGW-VRPEGSLNKEGDILLPHHQMRTLIHGDF 130
           +   +R  Y L      V G V GH+DG+G+ +R +G    + D+ LP  +M+ ++H D 
Sbjct: 67  IRLDQRNLYQLTHPSNFVAGRVQGHRDGYGFLIRDDG----QDDLFLPTAEMQKVMHNDR 122

Query: 131 VLVQPSGTDKRGRKEGRLVRILEERNGQIVGRFFFEYGYSYVVPDDSRIHHDILIPNDLR 190
           VL +  G D+RGR EG +V + +  N +++GR   E G   V P+D RI HDILI  + +
Sbjct: 123 VLARIVGYDRRGRPEGHIVEVTDRANKRVIGRLLNENGALIVAPEDKRIGHDILIQQNTK 182

Query: 191 AGARMGNVVVIEITDRGTRNRGMMGKVVEVLGENMAPGMETQIAIRTHQIPHEWPAEVEQ 250
             A++G VVV+E+TD  +R+   +G+VVEVLG+   PGME +IA+R + +PHE+      
Sbjct: 183 K-AKVGQVVVVELTDFPSRHSQPLGRVVEVLGDIDDPGMEIEIAVRKYGVPHEFSQAALD 241

Query: 251 QVAGLTEEVPEEAKQGRVDLRALPLVTIDGEDARDFDDAVYCE---AKKGGGWRLWVAIA 307
           + + L +EV     + R+DLR +PLVTIDGEDARDFDDAVYCE     +G G+RL VAIA
Sbjct: 242 EASRLPDEVRPVDARHRIDLRDVPLVTIDGEDARDFDDAVYCEPVQVGRGEGFRLIVAIA 301

Query: 308 DVSYYVRPDTALDKEAINRGNSVYFPSQVVPMLPEVLSNGLCSLNPQVDRLCMVCEMTVS 367
           DVS+YV P + LD +AI R  SVYFP +V+PMLPE LSNGLCSLNP VDR  +VC+M ++
Sbjct: 302 DVSHYVHPKSGLDADAIERSTSVYFPRRVIPMLPEKLSNGLCSLNPHVDRCVLVCDMIIT 361

Query: 368 ETGKLSGYKHYEAVMNSHARLTYTKVHEILE---GDEELRERYKALVPHLEELHKMYQVL 424
             G++  Y+ Y  VM+S ARLTYT+V  +L+   G E  R    AL+P L+ L+ +Y+ L
Sbjct: 362 ARGEVKAYQFYPGVMHSAARLTYTEVAAVLKNTKGPEATRRA--ALLPQLQNLYGVYKSL 419

Query: 425 KSARDERGAIEFETVETKFIFNAQRKIESIEPVVRNDAHKLIEECMILANIASASLVEKA 484
            +AR +RGAI+F+T ET  + NAQ KIE I P  RNDAHKLIEECM+ AN+ +A  +++ 
Sbjct: 420 FAARQKRGAIDFDTTETYIVCNAQGKIEQIIPRTRNDAHKLIEECMLAANVCAADFLKRN 479

Query: 485 KEAALYRVHEPPGEERLTGFRDFLGELGLDLSGGLEPSPTDYANLMKQIGERPDKELIQT 544
           K   L+RVH  P  E+L   R FL  +GL L+GG +P  +DYA LM QI ERPD +++QT
Sbjct: 480 KHPGLFRVHAGPTAEKLENLRTFLRGMGLTLAGGDKPHASDYAALMAQIRERPDAQMLQT 539

Query: 545 MLLRSMKQAVYNADNAGHFGLALKRYAHFTSPIRRYPDLLLHRAIKYLI----------- 593
           MLLRSM+QAVY+ DN GHFGLA + YAHFTSPIRRYPDLL HRAI  ++           
Sbjct: 540 MLLRSMQQAVYSPDNIGHFGLAYEAYAHFTSPIRRYPDLLTHRAIYAILQGRKYQPEPPQ 599

Query: 594 -------------AKQEGRNQDRWTPTGGYHYSFDDMDFYGEQCSMTERRADDATREVSD 640
                        A Q+  ++ R    G     ++++   G  CS  ERRAD+A+R+V  
Sbjct: 600 GVELNTALSPRARAMQQADDEKRGRVRGNNVAIWEEL---GLHCSANERRADEASRDVEA 656

Query: 641 WLKCEYMQDHVGEELEGVVANVTSFGFFVRLTELHIDGLVHISTLANDYYHYDPIGQRLV 700
           WLKC +M+D +GEE  G+V  VTSFG FV+L  L I+GLVH++ L +DY+ YD I   L 
Sbjct: 657 WLKCYFMRDKLGEEYGGMVNGVTSFGIFVQLDSLFIEGLVHVTELGSDYFQYDEIKNELR 716

Query: 701 GESFGAIYRLGDAVKVKVLAVNLDDRQIDFELVETS--RKLRGQGKTAKKRADEARAKAQ 758
           GE  G  YRL D V+V+V  V+LD R+IDF LV  +  +    +G +A K + E      
Sbjct: 717 GERTGIRYRLSDRVRVQVSRVDLDARKIDFRLVRDTPIKPPLVRGPSADKSSGENGGARV 776

Query: 759 GKKEAATKGACGKSPTKSELKPQVEATRRPDSEGRSKPKKTKAPKKR--KDQARKK 812
                A  GA      + +  P   A  +     R   KK  A  K   K QARKK
Sbjct: 777 RALPPAEGGAPAPGARRKKAAPAQTAAVKEARAARGAAKKHGAATKSAPKPQARKK 832