Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., rRNA methylase, putative, group 3 from Pseudomonas stutzeri RCH2

 Score =  275 bits (703), Expect = 6e-79
 Identities = 142/241 (58%), Positives = 179/241 (74%), Gaps = 2/241 (0%)

Query: 4   ELIYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDDKA 63
           E IYG+HAV A+L+  P R  + ++ +GR D R+  ++    +  VS+ +  R+ +D   
Sbjct: 5   EKIYGLHAVEALLRHHPKRVKQVWLAEGRGDPRVQVLIELAAQARVSVGQCERREMDAWV 64

Query: 64  EGANHQGLIARVKPARQLNENDLDDILAQHE-QPLLLVLDGVTDPHNLGACLRNADAAGV 122
           EG  HQG++A V P++   E  L+++L + E  PLLLVLDGVTDPHNLGAC+R ADAAG 
Sbjct: 65  EGV-HQGVVADVSPSQVWGEAMLEELLDRAEGPPLLLVLDGVTDPHNLGACMRTADAAGA 123

Query: 123 AAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATHD 182
            AVIVPKDKSA L ATV KVACGAAE +PLV VTNLART+  LQ++G+W VGTAGEA   
Sbjct: 124 LAVIVPKDKSATLNATVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEQS 183

Query: 183 IYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAVRQ 242
           +Y   LTG + ++MGAEG GMRRLTRE CD L+++PMAGSVSSLNVSVA GVCLFEA+RQ
Sbjct: 184 LYDQDLTGPIVLIMGAEGRGMRRLTREHCDYLVRLPMAGSVSSLNVSVATGVCLFEALRQ 243

Query: 243 R 243
           R
Sbjct: 244 R 244