Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., 23S rRNA Gm-2251 2'-O-methyltransferase from Pseudomonas syringae pv. syringae B728a

 Score =  278 bits (710), Expect = 1e-79
 Identities = 147/245 (60%), Positives = 179/245 (73%), Gaps = 2/245 (0%)

Query: 4   ELIYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDDKA 63
           E IYG+HAV A+L+  P R    ++ +GR D R+  ++       V+I +  R+ +D   
Sbjct: 5   EKIYGVHAVEALLRHHPKRVKHIWLAEGRNDPRVQTLVALAAENRVTIGQAERREMDAWV 64

Query: 64  EGANHQGLIARVKPARQLNENDLDDILAQHE-QPLLLVLDGVTDPHNLGACLRNADAAGV 122
           EG  HQG++A V P++   E  LD++L + E  PLLLVLDGVTDPHNLGACLR ADAAG 
Sbjct: 65  EGV-HQGVVADVSPSQVWGEAMLDELLDRSEGSPLLLVLDGVTDPHNLGACLRTADAAGA 123

Query: 123 AAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATHD 182
            AVIVPKDKSA LT  V KVACGAAE +PLV VTNLART+  LQ++G+W VGTAGEA  +
Sbjct: 124 LAVIVPKDKSATLTPAVRKVACGAAEVIPLVAVTNLARTLEKLQQRGLWVVGTAGEAEVE 183

Query: 183 IYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAVRQ 242
           +YQ  LTG   I+MGAEG GMRRLTRE CD L+++PMAGSVSSLNVSVA GVCLFEA+RQ
Sbjct: 184 LYQQDLTGPTIIIMGAEGKGMRRLTREHCDYLVRLPMAGSVSSLNVSVATGVCLFEALRQ 243

Query: 243 RMANR 247
           R A R
Sbjct: 244 RSAKR 248