Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., tRNA/rRNA methyltransferase from Sinorhizobium meliloti 1021

 Score =  120 bits (302), Expect = 2e-32
 Identities = 78/236 (33%), Positives = 119/236 (50%), Gaps = 10/236 (4%)

Query: 5   LIYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDD-KA 63
           L+YG+H V A L     R +   V    Q+      L +L  L    + +  + LD    
Sbjct: 59  LLYGLHTVRAALDNPERRIIRLSVT---QNAAARLDLGDLTALPFPTETVMPQELDRILG 115

Query: 64  EGANHQGLIARVKPARQLNENDLDDILAQHEQPLLLVLDGVTDPHNLGACLRNADAAGVA 123
             A HQG++   +P        L D       PL+LVLD VTDPHN+GA +R+A A    
Sbjct: 116 PDAIHQGVMLETQPLPHRKLEALRDC------PLILVLDQVTDPHNVGAIMRSAVAFDAG 169

Query: 124 AVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATHDI 183
           A+I     S   +  ++K A GA E +P +++TNLA T+  L E G   +G   E    +
Sbjct: 170 ALITTMRHSPTESGVLAKSASGALELIPYIQITNLADTLEELHELGFMTIGLDSEGPQPL 229

Query: 184 YQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEA 239
             +     +A+V+G+EG G+R+ TR+T   L ++ M G++ SLNVS A  + ++ A
Sbjct: 230 EGTFAGDKIALVLGSEGKGLRQKTRQTVKALARLDMPGAIKSLNVSNAAAIAMYAA 285