Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  317 bits (812), Expect = 1e-91
 Identities = 157/239 (65%), Positives = 189/239 (79%)

Query: 6   IYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDDKAEG 65
           ++GIHAV +VL+  P R +E +++ GRQD+R+LP+L      G+  Q+ +RK LD+KAE 
Sbjct: 1   MFGIHAVESVLKHAPERVLELWLMTGRQDERVLPLLEIAQNWGIKAQQAARKTLDEKAES 60

Query: 66  ANHQGLIARVKPARQLNENDLDDILAQHEQPLLLVLDGVTDPHNLGACLRNADAAGVAAV 125
             HQG+I RV+PA+ L ENDL+ +L   E P LL+LDGVTDPHNLGACLRNADAAGV  V
Sbjct: 61  TQHQGIIIRVRPAKVLTENDLEALLDATETPFLLILDGVTDPHNLGACLRNADAAGVHGV 120

Query: 126 IVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATHDIYQ 185
           IVPKD SA LT TVSKVACGAAETVPL +VTNLARTM+ +QE+GVW  GTAGEA   +Y+
Sbjct: 121 IVPKDNSAGLTPTVSKVACGAAETVPLFQVTNLARTMKRIQERGVWIAGTAGEADSTLYE 180

Query: 186 SKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAVRQRM 244
           + L G LAI MGAEG G+RRL+RE CD LI IPMAGSVSSLNVSVA G+CLFEAVRQR+
Sbjct: 181 ANLKGPLAIAMGAEGKGLRRLSREGCDTLISIPMAGSVSSLNVSVATGICLFEAVRQRL 239