Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., putative methyltransferase (RefSeq) from Shewanella amazonensis SB2B

 Score = 89.7 bits (221), Expect = 7e-23
 Identities = 70/251 (27%), Positives = 116/251 (46%), Gaps = 28/251 (11%)

Query: 6   IYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALD----- 60
           +YGI+A     +      ++ Y+     D+   P   ++M+        +RKA       
Sbjct: 97  LYGINACRETFKLRSDEVIKLYL-----DEETAPKFADVMKY----LARNRKAYHVVDAD 147

Query: 61  --DKAEGANHQG---LIARVKPARQLNENDLDDILAQH---EQPLLLVLDGVTDPHNLGA 112
             +K  G+ H G   ++ R KP +     D+   LA +    +  LL LDGV +PHNLGA
Sbjct: 148 ELEKIAGSQHHGGVVMVVRRKPVQ-----DIAGYLAANTAKSRDCLLALDGVGNPHNLGA 202

Query: 113 CLRNADAAGVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWF 172
            +R+    GVA +++  +     +   ++ A G  E V  +R   L   ++  ++ G   
Sbjct: 203 IMRSCAHFGVAGIVMT-EAGLLQSGAAARTAEGGMEHVEGIRCDRLTDALQLCRDAGYSI 261

Query: 173 VGTAGEATHDIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVAC 232
           + T+      +Y+SKL   + +V G E DG+ +      D  ++IP  G V SLNVSVA 
Sbjct: 262 ITTSSHGGESLYRSKLPARVVVVFGEEMDGVSKAVASRADIGVQIPGTGLVESLNVSVAA 321

Query: 233 GVCLFEAVRQR 243
            + L E  RQ+
Sbjct: 322 SLILGEWYRQQ 332