Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 249 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Parabacteroides merdae CL09T00C40

 Score =  131 bits (329), Expect = 1e-35
 Identities = 80/243 (32%), Positives = 125/243 (51%), Gaps = 3/243 (1%)

Query: 3   NELIYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDDK 62
           NE+++GI AV   +Q D     +  V +  Q D    +   L    + +Q +  + LD +
Sbjct: 4   NEMVFGIRAVIEAIQADK-EIDKILVKRELQGDLSRELFEVLKGRDIPVQRVPAERLD-R 61

Query: 63  AEGANHQGLIARVKPAR-QLNENDLDDILAQHEQPLLLVLDGVTDPHNLGACLRNADAAG 121
               NHQG+IA +     +  EN +  +  Q + P +++LDGVTD  N GA  R  + AG
Sbjct: 62  LTRKNHQGVIAFIPAITYERLENIIPFVYEQGKNPFIVLLDGVTDVRNFGAIARTCECAG 121

Query: 122 VAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATH 181
           V A+++P   S  + A   K + GA   + + +  ++   +R LQ  GV     + +A  
Sbjct: 122 VDAIVIPSRGSVTVNADAIKTSAGALHVLSVCKEKSITEAIRFLQASGVKVYAASEKAFE 181

Query: 182 DIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAVR 241
           +    K  G +AIVMGAE  G+       CD ++KIP  G++ SLNVSVA  + ++E VR
Sbjct: 182 NYTAIKYDGPVAIVMGAEDTGVSMDNLRICDSMVKIPQFGTIGSLNVSVASSILIYEVVR 241

Query: 242 QRM 244
           QRM
Sbjct: 242 QRM 244