Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., putative 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB from Phaeobacter inhibens DSM 17395

 Score =  132 bits (331), Expect = 9e-36
 Identities = 87/240 (36%), Positives = 130/240 (54%), Gaps = 13/240 (5%)

Query: 6   IYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDDKAEG 65
           ++G+HAV   L       +   V +  +      + + + + GV  + +  +  +   + 
Sbjct: 25  LFGLHAVRDALLNPKREKLRLMVTQNAE----AKLADAIAQSGVEAEVIDPRKFNPPIDK 80

Query: 66  AN-HQGLIARVKPARQLNENDLDDILAQHEQPLLLVLDGVTDPHNLGACLRNADAAGVAA 124
            + HQG    VKP   LN   LD+     E P +L+LD VTDPHN+GA LR+A+  G +A
Sbjct: 81  QSVHQGAALEVKP---LNWGGLDENCIGAEVPRVLLLDRVTDPHNVGAILRSAEVLGASA 137

Query: 125 VIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATHDIY 184
           VI  +  SAP T  ++K A GA E  P +R+ NLA T+  LQ  G   +G  GEA   I 
Sbjct: 138 VIGTRHNSAPETGALAKTASGALERQPYLRMRNLADTIVELQRMGFLVLGLDGEAEQTI- 196

Query: 185 QSKLTG----SLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAV 240
           ++ L G     +A+V+GAEG G+R+ T+ET D L+KI  AG   SLNVS A  + L+ ++
Sbjct: 197 EAVLDGRKGDPVALVLGAEGPGLRQKTKETVDHLVKIDAAGGFGSLNVSNAAAIALYASL 256