Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., 23S rRNA (guanosine-2'-O-)-methyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  326 bits (836), Expect = 2e-94
 Identities = 161/241 (66%), Positives = 192/241 (79%)

Query: 4   ELIYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDDKA 63
           +  +GIHAV A+L+  P R +E +VL+GR D RL+P++      GVS+Q+ SRKALDDKA
Sbjct: 5   DFTFGIHAVEALLKNSPERVIEMWVLQGRDDQRLMPLIAMAAEYGVSVQQASRKALDDKA 64

Query: 64  EGANHQGLIARVKPARQLNENDLDDILAQHEQPLLLVLDGVTDPHNLGACLRNADAAGVA 123
             + HQG++ R KPA+QLN+NDL  +L + E P LL+LDGVTDPHNLGACLRNADAAGV 
Sbjct: 65  GSSQHQGVLVRAKPAKQLNDNDLLALLDKTETPFLLILDGVTDPHNLGACLRNADAAGVH 124

Query: 124 AVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATHDI 183
            VIVP+D S  LT TVSKVACGAAE VPL +VTNLARTM+ALQEKGVW VG AGEA HD+
Sbjct: 125 GVIVPRDNSVGLTPTVSKVACGAAEVVPLFQVTNLARTMKALQEKGVWIVGAAGEAEHDL 184

Query: 184 YQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAVRQR 243
           Y++ L G +AI MGAE  G+RRLTRE+CD L  IPMAGSVSSLNVSVA G+CLFEAVRQR
Sbjct: 185 YKADLKGPIAIAMGAEDKGLRRLTRESCDSLASIPMAGSVSSLNVSVATGICLFEAVRQR 244

Query: 244 M 244
           +
Sbjct: 245 L 245