Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 253 a.a., rRNA methylase, putative, group 3 from Dechlorosoma suillum PS

 Score =  242 bits (617), Expect = 6e-69
 Identities = 131/239 (54%), Positives = 164/239 (68%), Gaps = 3/239 (1%)

Query: 5   LIYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDDKAE 64
           LI+G HAV A L+ +P    E Y+ + R+D R   +L      G+ +     K LD  A 
Sbjct: 14  LIHGFHAVIAKLRHNPDAVKEVYLDQSRKDARAKDLLRHAEAQGIRVIPADAKRLDGLAP 73

Query: 65  GANHQGLIARVKP-ARQLNENDLDDILAQHEQPLLLVLDGVTDPHNLGACLRNADAAGVA 123
           G  HQG++A+V    RQ+  +D+ D L   E PLLL+LDGVTDPHNLGACLR ADA G  
Sbjct: 74  GQRHQGVVAKVDANERQVTLDDVLDTL--EEPPLLLILDGVTDPHNLGACLRVADAVGAH 131

Query: 124 AVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAGEATHDI 183
           AVI PKD+S  LT TV KVA GAAETVP + VTNLART+R L+E+ +W +GTA +A  D+
Sbjct: 132 AVIAPKDRSVGLTNTVLKVASGAAETVPYITVTNLARTLRELKERDIWIIGTADQADGDL 191

Query: 184 YQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLFEAVRQ 242
           Y ++     A V+GAEG+GMRRLTRETCD L++IPM GSV SLNVSVA GVCL+EA R+
Sbjct: 192 YTAEWPKGTAWVLGAEGEGMRRLTRETCDQLVRIPMFGSVESLNVSVASGVCLYEARRR 250