Pairwise Alignments

Query, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., putative rRNA methylase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 72.0 bits (175), Expect = 1e-17
 Identities = 45/141 (31%), Positives = 69/141 (48%)

Query: 98  LLVLDGVTDPHNLGACLRNADAAGVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTN 157
           ++V+DGV D  N+GA  R+A A G+ AV++ ++   PL     +V+ G    VP   +  
Sbjct: 122 IVVIDGVVDTTNIGAIFRSAAALGIDAVLLTRNSCDPLNRRAVRVSMGTVFLVPWTWMDG 181

Query: 158 LARTMRALQEKGVWFVGTAGEATHDIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKI 217
               +  L  +      T    + D         LAIVMG EGDG+   T    D +++I
Sbjct: 182 SLSDLGKLGFRTAAMALTDNSVSIDDPVLATEPRLAIVMGTEGDGLSPETIAEADYVVRI 241

Query: 218 PMAGSVSSLNVSVACGVCLFE 238
           PM+  V SLNV+ A  V  ++
Sbjct: 242 PMSHGVDSLNVAAAAAVAFWQ 262