Pairwise Alignments

Query, 274 a.a., 50S ribosomal protein L2 from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., 50S ribosomal protein L2 from Methanococcus maripaludis JJ

 Score =  130 bits (327), Expect = 3e-35
 Identities = 86/236 (36%), Positives = 121/236 (51%), Gaps = 19/236 (8%)

Query: 45  NNGRITVRHIGGGHKQH----YRLVDFKRTKDG-IPAKVERLEYDPNRSANIALVLYADG 99
           N GR T ++    HK+     YR  D +  KDG I   V  + +DP RSA +A V +A+ 
Sbjct: 9   NRGRGTPKYRSPTHKRKGAVKYRSYD-EMEKDGKILGTVIDILHDPGRSAPVAKVKFAND 67

Query: 100 ERRYIIAPKGLQAGDVIQSGPDAPIKAGNAMPMRNIPVGSTIHNVELTPGKGAQLARSAG 159
           E R ++ P+G+Q G+ I+ G  A IK GN +P+  IP G  ++N+E  PG G +L RS G
Sbjct: 68  EERLVLIPEGIQVGEEIECGISAEIKPGNVLPLGEIPEGIPVYNIETIPGDGGKLVRSGG 127

Query: 160 AYAQLVARDGAYVTLRLRSGEMRKVLSEGRATIGEVGNAEHMLRELGKAG---------A 210
            YA +++ D     +RL SG  + +    RAT+G V       +   KAG         A
Sbjct: 128 CYAHVISHDVGKTIVRLPSGFSKVLNPACRATVGVVAGGGRKEKPFVKAGKKYHSLSAKA 187

Query: 211 ARWRGVRPTVRGVVMNPVDHPHGGGEGRTSGGRHPVSPWGVPTKGYKTRSNKRTDK 266
             W    P VRGV MN VDHP+GGG  +  G    VS    P +     +++RT K
Sbjct: 188 VAW----PKVRGVAMNAVDHPYGGGRHQHIGKPSSVSRHTSPGRKVGHIASRRTGK 239