Pairwise Alignments

Query, 233 a.a., 30S ribosomal protein S3 from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., ribosomal protein S3, bacterial type from Pseudomonas stutzeri RCH2

 Score =  320 bits (821), Expect = 1e-92
 Identities = 160/228 (70%), Positives = 186/228 (81%), Gaps = 3/228 (1%)

Query: 1   MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60
           MGQKVHP GIRLGIVK   + W+A+ + +AD L  D  VR+YL  +L +AS+SRI I RP
Sbjct: 1   MGQKVHPTGIRLGIVKEHTSVWYADGRTYADYLLADLNVREYLQDKLKSASVSRIDIHRP 60

Query: 61  AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
           A++ R+TIHTARPG+VIGKKGEDVEKLR  + K  GVP  INI E+RKPELD  LVA S+
Sbjct: 61  AQTARITIHTARPGIVIGKKGEDVEKLRQDLTKQMGVPVHINIEEIRKPELDAMLVAQSV 120

Query: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
           A QLERRVMFRRAMKRAVQNAMR+GAKGIK++VSGRLGGAEIAR+EWYREGRVPLHTLRA
Sbjct: 121 AQQLERRVMFRRAMKRAVQNAMRIGAKGIKIQVSGRLGGAEIARTEWYREGRVPLHTLRA 180

Query: 181 DIDYATSSAHTTYGVIGVKVWIFKGEILGGMPAATEAAEPKADKPKKQ 228
           DIDY T  AHTTYGVIGVKVWIFKGE++GG     E  +P+A  P+K+
Sbjct: 181 DIDYNTYEAHTTYGVIGVKVWIFKGEVIGG---RHEELKPQAPAPRKK 225