Pairwise Alignments

Query, 233 a.a., 30S ribosomal protein S3 from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., 30S ribosomal protein S3 from Phaeobacter inhibens DSM 17395

 Score =  282 bits (721), Expect = 5e-81
 Identities = 140/232 (60%), Positives = 174/232 (75%), Gaps = 1/232 (0%)

Query: 1   MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60
           MG KV+P G+RL + + W++ W+A+TKD+ D L  D ++R ++ +E   A ++R++IERP
Sbjct: 1   MGHKVNPVGMRLQVNRTWDSRWYADTKDYGDLLLEDLRIRDFIKEECKQAGIARVIIERP 60

Query: 61  AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
            K  RVTIHTARPGV+IGKKG D+E LR  +A +      +NI EVRKPELD QLV +SI
Sbjct: 61  HKKCRVTIHTARPGVIIGKKGADIEVLRKKLASMTDSELHLNIVEVRKPELDAQLVGESI 120

Query: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
           A QLERRV FRRAMKRAVQNAMR+GA GI+V V+GRLGGAEIAR+EWYREGRVPLHTLRA
Sbjct: 121 AQQLERRVSFRRAMKRAVQNAMRMGALGIRVNVAGRLGGAEIARTEWYREGRVPLHTLRA 180

Query: 181 DIDYATSSAHTTYGVIGVKVWIFKGEILGGMPAATE-AAEPKADKPKKQRKG 231
           DIDYA S A T YG+IG+K WIFKGEI+   P A +  A+   D P  +  G
Sbjct: 181 DIDYAHSEAMTPYGIIGIKTWIFKGEIMEHDPQARDRKAQELQDGPAPRGAG 232