Pairwise Alignments

Query, 233 a.a., 30S ribosomal protein S3 from Vibrio cholerae E7946 ATCC 55056

Subject, 229 a.a., 30S ribosomal protein S3 (RefSeq) from Shewanella loihica PV-4

 Score =  360 bits (923), Expect = e-104
 Identities = 178/232 (76%), Positives = 207/232 (89%), Gaps = 3/232 (1%)

Query: 1   MGQKVHPNGIRLGIVKPWNATWFANTKDFADNLDGDFKVRQYLSKELANASLSRIVIERP 60
           MGQKVHPNGIRLGI KPW +TW+A+  D+A+NL  D++VR++L K+L  AS+S+IVIERP
Sbjct: 1   MGQKVHPNGIRLGITKPWISTWYADKSDYANNLSSDWEVRKFLEKKLKQASVSKIVIERP 60

Query: 61  AKSIRVTIHTARPGVVIGKKGEDVEKLRAAVAKIAGVPAQINIAEVRKPELDGQLVADSI 120
           AKS+RVTIHTARPGVVIGKKGEDVEKLR  VAK+ G+PAQINIAE+RKPELD +LVA+ I
Sbjct: 61  AKSVRVTIHTARPGVVIGKKGEDVEKLRNEVAKLTGIPAQINIAEIRKPELDAKLVAEGI 120

Query: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180
           ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA
Sbjct: 121 ASQLERRVMFRRAMKRAVQNAMRLGAKGIKVEVSGRLGGAEIARSEWYREGRVPLHTLRA 180

Query: 181 DIDYATSSAHTTYGVIGVKVWIFKGEILGGMPAATEAAEPKADKPKKQRKGR 232
           DIDY+T+ +HT YGVIGVKVW+FKGE+L G+  A E  EPK  +PK++ +G+
Sbjct: 181 DIDYSTAESHTQYGVIGVKVWVFKGEVLDGVVPALE--EPK-QQPKRKPRGK 229