Pairwise Alignments

Query, 177 a.a., 50S ribosomal protein L6 from Vibrio cholerae E7946 ATCC 55056

Subject, 189 a.a., 50S ribosomal protein L6 (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  157 bits (398), Expect = 8e-44
 Identities = 85/184 (46%), Positives = 116/184 (63%), Gaps = 9/184 (4%)

Query: 1   MSRVAKAPVAIPAGVEVKLNGQEITIKGAKGELTRVFHNGVVIAQEDNQLTFGPRE---- 56
           MSR+ K P++IPAGV V L    +T+KG KGEL++  +  + +A ED  +T    E    
Sbjct: 1   MSRIGKLPISIPAGVTVTLKDDVVTVKGPKGELSQYVNPAINVAIEDGHVTLTENEKEMI 60

Query: 57  -GVANAWAQAGTARALVKNMVVGVTEGFTKKLVLKGVGYRAAMKGNAVGLTLGFSHPVEH 115
                  A  G  R+LV NMVVGV+EG+ K+L L GVGYRA+ +GN + L LG++H +  
Sbjct: 61  DNPKQKHAFHGLYRSLVHNMVVGVSEGYKKELELVGVGYRASNQGNIIELALGYTHNIFI 120

Query: 116 ELPAGVKAECPSQTE----IVLTGCDKQVVGQVAADIRSYRAPEPYKGKGIRYADENVRS 171
           +LPA VK E  S+      I+L  CDKQ++GQV + IRS+R PEPYKGKGI++  E +R 
Sbjct: 121 QLPAEVKVETKSERNKNPLIILESCDKQLLGQVCSKIRSFRKPEPYKGKGIKFVGEVIRR 180

Query: 172 KEAK 175
           K  K
Sbjct: 181 KSGK 184