Pairwise Alignments

Query, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

Subject, 442 a.a., preprotein translocase, SecY subunit from Pseudomonas stutzeri RCH2

 Score =  593 bits (1529), Expect = e-174
 Identities = 291/432 (67%), Positives = 364/432 (84%), Gaps = 5/432 (1%)

Query: 12  AQSGLSELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGA 71
           +  GLSEL +RL F+  A++V+R G+ +P+PGI+   LAELF Q +GTI+ +FNMFSGGA
Sbjct: 11  SNGGLSELWARLRFLFMAIIVYRIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGA 70

Query: 72  LERASILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQ 131
           LER SI ALGIMPYISASI++QL+T V P L +LKKEGEAGRRKISQYTRYGTLVLA  Q
Sbjct: 71  LERMSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTLVLAIVQ 130

Query: 132 AIGIATGLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFA 191
           A+G++ GL      +   +   F  +A  + V+G MF+MWLGEQITERG+GNGIS+LIFA
Sbjct: 131 AVGMSVGLAGQ--GVAFSNDFGFYFVAITTFVSGAMFMMWLGEQITERGVGNGISMLIFA 188

Query: 192 GIVAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQ 251
           GIVAGLP A+GQ+ E ARQG+++++ LL + +LA A+I FVVF+ERGQRRI V+YAKRQQ
Sbjct: 189 GIVAGLPGALGQSFESARQGDINIIALLAVGLLAVAIIGFVVFIERGQRRIAVHYAKRQQ 248

Query: 252 GRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLAL 311
           GRKVFAAQ++HLPLK+NMAGVIPAIFASSI+LFP +L QWFGQ   S + GWL DVS A+
Sbjct: 249 GRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGQWFGQ---SESMGWLADVSQAI 305

Query: 312 SPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVM 371
           +PGQPL ++L++A IIFFCFFYTAL+FNP++ A+NLKKSGAF+PGIRPGEQ+A+YID V+
Sbjct: 306 APGQPLNILLFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVL 365

Query: 372 TRLTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQVQTHLMSHQYE 431
           TRLT+ GALY+T +CL+P+F++VA NV FY GGTSLLIVVVV+MDFM+QVQ+HLMSHQY+
Sbjct: 366 TRLTMFGALYMTAVCLLPQFLVVAANVPFYLGGTSLLIVVVVVMDFMSQVQSHLMSHQYD 425

Query: 432 SVLKKANLKGYG 443
           S++KKANLKGYG
Sbjct: 426 SLMKKANLKGYG 437