Pairwise Alignments

Query, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

Subject, 444 a.a., protein translocase subunit secY/sec61 alpha from Pseudomonas syringae pv. syringae B728a

 Score =  587 bits (1512), Expect = e-172
 Identities = 288/431 (66%), Positives = 361/431 (83%), Gaps = 5/431 (1%)

Query: 13  QSGLSELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGAL 72
           + G+SEL +RL F+  A++V+R G+ +P+PGI+   LAELF Q +GTI+ +FNMFSGGAL
Sbjct: 12  KGGMSELWARLRFLFLAIIVYRIGAHIPVPGINPDRLAELFRQNEGTILSLFNMFSGGAL 71

Query: 73  ERASILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQA 132
           ER SI ALGIMPYISASI++QL+T V P L +LKKEGEAGRRKISQYTRYGT+VLA  QA
Sbjct: 72  ERMSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTRYGTVVLALVQA 131

Query: 133 IGIATGLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIFAG 192
           IG++ GL +    +       F  +A  + V G MF+MWLGEQITERG+GNGIS+LIFAG
Sbjct: 132 IGMSVGLASQ--GVAFSGDLGFHFVAVTTFVAGAMFMMWLGEQITERGVGNGISMLIFAG 189

Query: 193 IVAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQG 252
           IVAGLP+AIGQ+ E ARQG++++  L+ I +LA A+I FVVF+ERGQRRI V+YAKRQQG
Sbjct: 190 IVAGLPRAIGQSFESARQGDINIFALVAIGLLAVAIIGFVVFIERGQRRIAVHYAKRQQG 249

Query: 253 RKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALS 312
           RKVFAAQ++HLPLK+NMAGVIPAIFASSI+LFP +L  WFGQ   S   GWL D+S +++
Sbjct: 250 RKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGSWFGQ---SEGLGWLQDISQSIA 306

Query: 313 PGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMT 372
           PGQPL ++L++A IIFFCFFYTAL+FNP++ A+NLKKSGAF+PGIRPGEQ+A+YID V+T
Sbjct: 307 PGQPLNILLFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSARYIDGVLT 366

Query: 373 RLTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQVQTHLMSHQYES 432
           RLT+ GALY+T +CL+P+F++VA NV FY GGTSLLIVVVV+MDFM+QVQ+HL+SHQYES
Sbjct: 367 RLTMFGALYMTAVCLLPQFLVVAANVPFYLGGTSLLIVVVVVMDFMSQVQSHLVSHQYES 426

Query: 433 VLKKANLKGYG 443
           ++KKANLKGYG
Sbjct: 427 LMKKANLKGYG 437