Pairwise Alignments

Query, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., SecY protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  473 bits (1218), Expect = e-138
 Identities = 238/428 (55%), Positives = 316/428 (73%), Gaps = 7/428 (1%)

Query: 17  SELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERAS 76
           +ELK R++F + AL+V+R G+++P+PGID   +A++F +  G I+ MF+MF+GGAL R +
Sbjct: 21  TELKKRIWFTLAALVVYRVGTYIPLPGIDPQAMADVFSRNGGGILGMFDMFAGGALSRMT 80

Query: 77  ILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAIGIA 136
           I AL IMPYISASI++QL+T + P L  LKKEGE+GR++I+QYTRY T+++   QA GIA
Sbjct: 81  IFALNIMPYISASIIMQLMTSISPQLEALKKEGESGRKRINQYTRYLTVLITALQAYGIA 140

Query: 137 TGLPNMVNN--LVVIDQTMFTLIATV-SLVTGTMFLMWLGEQITERGIGNGISILIFAGI 193
            GL +M ++    V D  MF    TV +L+ GT+FLMWLGEQIT RG+GNGIS++IF GI
Sbjct: 141 VGLESMTSSSGAAVHDAGMFFRFTTVVTLMGGTLFLMWLGEQITARGVGNGISLIIFTGI 200

Query: 194 VAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQQGR 253
           VA LP A+   +E  R G L   ++L I VLA  VI F+VFMER QRRI++ Y KRQQG 
Sbjct: 201 VAQLPHALVGMLELGRTGALSPAVILGILVLAVGVIAFIVFMERAQRRILIQYPKRQQGN 260

Query: 254 KVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLALSP 313
           K++  +S+H+PLKIN  GVIP IFASSI+L P T AQ+    G      WLT ++  L  
Sbjct: 261 KMYGGESSHMPLKINTPGVIPPIFASSILLLPMTAAQFSAGQGPE----WLTTITTLLGH 316

Query: 314 GQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKVMTR 373
           GQPLY+ LYAA I FF FFYTA+VFNP +TA+NLKK G F+PGIRPG  T++Y+D V+TR
Sbjct: 317 GQPLYMALYAALIAFFAFFYTAVVFNPEDTAENLKKYGGFIPGIRPGRNTSEYLDYVLTR 376

Query: 374 LTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQVQTHLMSHQYESV 433
           LT  GA+Y+ FI ++PEF++    V FYFGGTSLLIVV V MD +AQ+Q+HL++HQYE +
Sbjct: 377 LTAVGAIYLIFISILPEFLISKVGVPFYFGGTSLLIVVTVTMDTVAQIQSHLLAHQYEGL 436

Query: 434 LKKANLKG 441
           +KK+ L+G
Sbjct: 437 IKKSKLRG 444