Pairwise Alignments

Query, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., Probable preprotein translocase SecY from Mycobacterium tuberculosis H37Rv

 Score =  333 bits (853), Expect = 8e-96
 Identities = 184/434 (42%), Positives = 275/434 (63%), Gaps = 21/434 (4%)

Query: 18  ELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQ----QKGTIVEMFNMFSGGALE 73
           +L+ ++ F +G ++++R G+ +P PG++   + +  ++    + G I  + N+FSGGAL 
Sbjct: 13  DLRRKILFTLGIVILYRVGAALPSPGVNFPNVQQCIKEASAGEAGQIYSLINLFSGGALL 72

Query: 74  RASILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYGTLVLATFQAI 133
           + ++ A+G+MPYI+ASI+VQLLTVV P   EL+KEG+AG+ K++QYTRY  + LA  QA 
Sbjct: 73  KLTVFAVGVMPYITASIIVQLLTVVIPRFEELRKEGQAGQSKMTQYTRYLAIALAILQAT 132

Query: 134 GIAT-----GLPNMVNNLVVIDQTMFTLIATVSLVT-GTMFLMWLGEQITERGIGNGISI 187
            I       GL    +  ++ DQ++FTL+  V ++T G   +MW+GE ITERGIGNG+S+
Sbjct: 133 SIVALAANGGLLQGCSLDIIADQSIFTLVVIVLVMTGGAALVMWMGELITERGIGNGMSL 192

Query: 188 LIFAGIVAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYA 247
           LIF GI A +P A GQ+I ++R G    ++   +   A  +I  VVF+E+GQRRI V YA
Sbjct: 193 LIFVGIAARIP-AEGQSILESRGG----VVFTAVCAAALIIIVGVVFVEQGQRRIPVQYA 247

Query: 248 KRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWF-GQNGESSTFGWLTD 306
           KR  GR+++   ST+LPLK+N AGVIP IFASS+I  P  + Q     +G      W   
Sbjct: 248 KRMVGRRMYGGTSTYLPLKVNQAGVIPVIFASSLIYIPHLITQLIRSGSGVVGNSWWDKF 307

Query: 307 VSLALS-PGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAK 365
           V   LS P   +Y+ +Y   IIFF +FY ++ FNP E AD +KK G F+PGIRPG  TA 
Sbjct: 308 VGTYLSDPSNLVYIGIYFGLIIFFTYFYVSITFNPDERADEMKKFGGFIPGIRPGRPTAD 367

Query: 366 YIDKVMTRLTLAGALYITFICLIPE-FMMVAWN---VRFYFGGTSLLIVVVVIMDFMAQV 421
           Y+  V++R+TL G++Y+  I ++P  F+ +          FGGT++LI++ V +D + Q+
Sbjct: 368 YLRYVLSRITLPGSIYLGVIAVLPNLFLQIGAGGTVQNLPFGGTAVLIMIGVGLDTVKQI 427

Query: 422 QTHLMSHQYESVLK 435
           ++ LM   YE  LK
Sbjct: 428 ESQLMQRNYEGFLK 441