Pairwise Alignments

Query, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., preprotein translocase subunit SecY (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  441 bits (1133), Expect = e-128
 Identities = 219/431 (50%), Positives = 305/431 (70%), Gaps = 12/431 (2%)

Query: 16  LSELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERA 75
           L EL+ +LF+    L  +R G  VP+PG+D+  LA+ F   + T+  +F+MFSGG L   
Sbjct: 12  LPELRKKLFWTFLLLAAYRIGVHVPVPGVDSGALADFFASVQNTLFGLFDMFSGGGLRNL 71

Query: 76  SILALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIG 134
           S+ ALGIMPYISASI++QLL VV P L  + K+EG AGRRKI+QYTRY T+++   Q  G
Sbjct: 72  SVFALGIMPYISASIIIQLLQVVSPELKRMAKEEGAAGRRKITQYTRYATVLITVIQGFG 131

Query: 135 IATGLPNMVNNL---VVIDQTM-FTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIF 190
           IA GL NM +     VV+D    F +I   +L  GT+ +MWLGEQITE+GIGNGIS++IF
Sbjct: 132 IAVGLENMHSPAGAPVVLDAGWGFRMITIATLTAGTVLIMWLGEQITEKGIGNGISLIIF 191

Query: 191 AGIVAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQ 250
           +GIVAG+P  I ++ +  + G++ V   +L+  L   V+  +VFMERGQRRI ++YAKRQ
Sbjct: 192 SGIVAGIPGGIVKSGQLIKAGDMSVFTAILVLALMAVVLGCIVFMERGQRRIPIHYAKRQ 251

Query: 251 QGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLA 310
            GRK+F  QSTHLPL+IN AGVIP IFASS++LFP T+A +           W       
Sbjct: 252 VGRKMFGGQSTHLPLRINTAGVIPPIFASSLLLFPATIASFSANETLQRVAAWF------ 305

Query: 311 LSPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKV 370
            +P   +Y +L+ + I+FFCFFYTA++F+P++ A+NLKK G F+PGIRPG++T +YID+V
Sbjct: 306 -APHTVMYNILFISLIVFFCFFYTAIIFDPKDIAENLKKGGGFIPGIRPGDKTRQYIDRV 364

Query: 371 MTRLTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQVQTHLMSHQY 430
           +TR+T+ GA+YI+ IC++P  ++  +NV FYFGGTS+LI+V V MDFM+QV++HL+S QY
Sbjct: 365 LTRMTIWGAIYISAICVLPMILIAQFNVPFYFGGTSVLILVGVAMDFMSQVESHLISRQY 424

Query: 431 ESVLKKANLKG 441
           E ++ K  +KG
Sbjct: 425 EGLMNKTRIKG 435