Pairwise Alignments

Query, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., preprotein translocase, SecY subunit (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  431 bits (1108), Expect = e-125
 Identities = 217/431 (50%), Positives = 309/431 (71%), Gaps = 12/431 (2%)

Query: 16  LSELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEMFNMFSGGALERA 75
           L EL+S+L +    L  +R G  VPIPG+D++ LA+ F   + T+  +F+MFSGG L   
Sbjct: 12  LPELRSKLMWTFLLLAAYRIGVHVPIPGVDSSALADFFASVQNTLFGLFDMFSGGGLRNL 71

Query: 76  SILALGIMPYISASIVVQLLTVVHPALAEL-KKEGEAGRRKISQYTRYGTLVLATFQAIG 134
           S+ ALGIMPYISASI++QLL VV P L  L K+EG AG+RK++QYTRY T+++   Q +G
Sbjct: 72  SVFALGIMPYISASIILQLLQVVSPDLKRLAKEEGAAGKRKLTQYTRYATVLITVIQGLG 131

Query: 135 IATGLPNMVNNL---VVIDQTM-FTLIATVSLVTGTMFLMWLGEQITERGIGNGISILIF 190
           IA GL +M +     VV++    F L+  ++L  GT+ +MWLGEQITE+G+GNGIS++IF
Sbjct: 132 IAIGLESMHSPAGAPVVLEAGWAFRLVTIITLTAGTVLIMWLGEQITEKGLGNGISLIIF 191

Query: 191 AGIVAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIVVNYAKRQ 250
           +GIVAG+P  I ++ +    G++ +   ++I  L   V+  +VF+ER QRRI ++YAKRQ
Sbjct: 192 SGIVAGIPGGILKSAQLISAGDMSLFAAIVILALMGLVLAGIVFVERAQRRIPIHYAKRQ 251

Query: 251 QGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGWLTDVSLA 310
            GRK+F  Q+THLPL++N AGVIP IFASS++LFP T+A +       +T  WL  V+  
Sbjct: 252 VGRKMFGGQTTHLPLRVNTAGVIPPIFASSLLLFPATVANF-------ATSDWLKSVASW 304

Query: 311 LSPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQTAKYIDKV 370
            SP    Y +L+ A I+FF FFYTA++F+P++ A+NLKK G F+PGIRPG++T +YIDKV
Sbjct: 305 FSPHTIPYNILFIALIVFFSFFYTAIIFDPKDIAENLKKGGGFIPGIRPGDKTKEYIDKV 364

Query: 371 MTRLTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQVQTHLMSHQY 430
           +TR+TL GA+YI+ I ++P F++  +NV FYFGGTSLLI+V V MDFM+Q+++HL+S QY
Sbjct: 365 LTRITLWGAIYISVISVLPMFLIAQFNVPFYFGGTSLLILVGVAMDFMSQIESHLISRQY 424

Query: 431 ESVLKKANLKG 441
           E ++ K  +KG
Sbjct: 425 EGLMNKTRIKG 435