Pairwise Alignments

Query, 444 a.a., protein translocase subunit SecY from Vibrio cholerae E7946 ATCC 55056

Subject, 446 a.a., preprotein translocase subunit SecY (RefSeq) from Shewanella sp. ANA-3

 Score =  727 bits (1876), Expect = 0.0
 Identities = 370/436 (84%), Positives = 403/436 (92%), Gaps = 3/436 (0%)

Query: 4   KPGQDFRSAQSGLSELKSRLFFVIGALLVFRAGSFVPIPGIDAAVLAELFEQQKGTIVEM 63
           KPG D +SA+ GLSELK+RL FVIGA++VFRAGSFVPIPGIDAAVLAELF QQKGTI+ M
Sbjct: 3   KPGLDLKSAKGGLSELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFAQQKGTILGM 62

Query: 64  FNMFSGGALERASILALGIMPYISASIVVQLLTVVHPALAELKKEGEAGRRKISQYTRYG 123
           FNMFSGGAL RASI ALGIMPYISASI++QLLTVVHPALAELKKEGE+GR+KISQYTR+G
Sbjct: 63  FNMFSGGALSRASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTRWG 122

Query: 124 TLVLATFQAIGIATGLPNMVNNLVVIDQTMFTLIATVSLVTGTMFLMWLGEQITERGIGN 183
           TLVL TFQ+IGIATGLPN+V  LVV     F  +A VSLVTGTMFLMWLGEQITERGIGN
Sbjct: 123 TLVLGTFQSIGIATGLPNLVPGLVVNIGFGFYFVAVVSLVTGTMFLMWLGEQITERGIGN 182

Query: 184 GISILIFAGIVAGLPKAIGQTIEQARQGELHVLLLLLIAVLAFAVIYFVVFMERGQRRIV 243
           GISILIFAGIVAGLP AIGQT EQARQG+L+VL+LLL+AV+ FAV YFVVF+ERGQRRIV
Sbjct: 183 GISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLLAVIIFAVTYFVVFVERGQRRIV 242

Query: 244 VNYAKRQQGRKVFAAQSTHLPLKINMAGVIPAIFASSIILFPGTLAQWFGQNGESSTFGW 303
           VNYAKRQQGRKVFAAQSTHLPLKINMAGVIP IFASSIILFPGTLAQWFGQN    +  W
Sbjct: 243 VNYAKRQQGRKVFAAQSTHLPLKINMAGVIPPIFASSIILFPGTLAQWFGQN---ESMSW 299

Query: 304 LTDVSLALSPGQPLYVMLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFVPGIRPGEQT 363
           L+D SLA+SPGQPLY +LYAAAIIFFCFFYTALVFNPRETADNLKKSGAF+PGIRPGEQT
Sbjct: 300 LSDFSLAVSPGQPLYSLLYAAAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQT 359

Query: 364 AKYIDKVMTRLTLAGALYITFICLIPEFMMVAWNVRFYFGGTSLLIVVVVIMDFMAQVQT 423
           ++YIDKVMTRLTLAGALYITFICLIPEFM++AW V+FYFGGTSLLI+VVVIMDFMAQVQT
Sbjct: 360 SRYIDKVMTRLTLAGALYITFICLIPEFMLIAWKVQFYFGGTSLLIMVVVIMDFMAQVQT 419

Query: 424 HLMSHQYESVLKKANL 439
           H+MSHQYESV+KKANL
Sbjct: 420 HMMSHQYESVMKKANL 435