Pairwise Alignments

Query, 206 a.a., 30S ribosomal protein S4 from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., 30S ribosomal protein S4 from Synechococcus elongatus PCC 7942

 Score =  152 bits (383), Expect = 5e-42
 Identities = 86/208 (41%), Positives = 124/208 (59%), Gaps = 10/208 (4%)

Query: 1   MARYLGPKLKLSRREGT--DLFLKSGVRAIDTKCKIDNAPGVHGARRGRLSEYGVQLREK 58
           M+RY GP+L++ RR G    L  K+  R+          PG HG  R + SEY ++L EK
Sbjct: 1   MSRYRGPRLRIVRRLGDLPGLTRKAARRSYP--------PGQHGQARRKRSEYAIRLEEK 52

Query: 59  QKVRRIYGVLEKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQLV 118
           QK+R  YG+ E+Q   Y K+A R++G+TG NLLQLLE RLDN+V+R+GF  T   ARQLV
Sbjct: 53  QKLRFNYGLSERQLVRYVKKARRMQGSTGTNLLQLLEMRLDNLVFRLGFAPTIPGARQLV 112

Query: 119 SHKAILVNGKVVNVPSFNVAANDVVAVREKAKKQSRIKAALEVAEQREKPTWIEVDVNTM 178
           +H  + VNG+VV++ S+N    +V+ VR++   +  + A LE       P  ++ D N +
Sbjct: 113 NHGHVTVNGRVVDIASYNCRPGEVIGVRQREASRKLVTANLEYPGLANVPVHLDFDKNKL 172

Query: 179 EGTFKRMPERSDLSADINEQLIVELYSK 206
           E       ER  ++  INE L+VE YS+
Sbjct: 173 EAKVTGACEREWVALQINELLVVEYYSR 200