Pairwise Alignments

Query, 206 a.a., 30S ribosomal protein S4 from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., ribosomal protein S4 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  200 bits (509), Expect = 1e-56
 Identities = 107/209 (51%), Positives = 133/209 (63%), Gaps = 4/209 (1%)

Query: 1   MARYLGPKLKLSRREGTDLFLKSGVRAIDTKCKIDN---APGVHGARRGRLSEYGVQLRE 57
           MA+Y   K +  RREGT LFLK G R    KC  D    APG HG  R ++S+Y VQLRE
Sbjct: 1   MAKYTDAKCRQCRREGTKLFLK-GDRCFTDKCAFDRRPYAPGQHGRARKKVSDYAVQLRE 59

Query: 58  KQKVRRIYGVLEKQFRNYYKEAARLKGNTGENLLQLLEGRLDNVVYRMGFGATRAEARQL 117
           KQKVRR+YG+LE+QF  Y+ +A   KG TG NLL LLE RLDNV+YR+GF  +R +ARQL
Sbjct: 60  KQKVRRMYGILEQQFHAYFTKADMAKGVTGANLLSLLERRLDNVIYRLGFANSRNQARQL 119

Query: 118 VSHKAILVNGKVVNVPSFNVAANDVVAVREKAKKQSRIKAALEVAEQREKPTWIEVDVNT 177
           V H    +NG+ VN+PS  V   D + V EK++K   +  A EV  +R  P W+E D   
Sbjct: 120 VRHGIFTLNGRKVNIPSLQVRIGDTIEVPEKSRKIPVLAEAQEVIARRGCPAWLEADGAN 179

Query: 178 MEGTFKRMPERSDLSADINEQLIVELYSK 206
             G  K +P+R D+   INE LIVELYSK
Sbjct: 180 FRGVVKALPQREDIQFPINEHLIVELYSK 208