Pairwise Alignments

Query, 206 a.a., peptidylprolyl isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., FKBP-type peptidyl-prolyl cis-trans isomerase FkpA (RefSeq) from Shewanella amazonensis SB2B

 Score =  142 bits (358), Expect = 5e-39
 Identities = 89/212 (41%), Positives = 118/212 (55%), Gaps = 12/212 (5%)

Query: 4   VKFETVEQKASYGIGLQMGQQLAGSGLE----GLNV--AAIAAGIATALVGEQPAISIDE 57
           V   T  QK +Y +G  +G  ++G   E    GL    A I  G A  L G    ++ +E
Sbjct: 33  VSLTTEAQKEAYSVGASIGSYMSGHIKEQEALGLPADRALIVEGFANGLNGSLK-LTEEE 91

Query: 58  INQALHAIHMRAEEARQEAAKVAAS----EGEAFLKDNALRPEVTVLESGLQYEVLVEGN 113
           +   L  +  +  + R   A+  A+    +G+ + + N  +  VT  ESGLQYEVLV G 
Sbjct: 92  MQTVLQNLDKKLNDKRVAQAEAMAAKNLEDGKKYQETNKAKEGVTTTESGLQYEVLVAGE 151

Query: 114 GAIPTSDKSVRVHYHGQLVDGTVFDSSVSRGQPAEFPVTGVIRGWVEALQLMPVGSKWKL 173
           G  P ++  V VHY G L+DGT FDSS  RGQ A+FP+  VI GW E +QLM VGSK++ 
Sbjct: 152 GDKPAAEDVVEVHYAGTLIDGTPFDSSYDRGQTAKFPLNRVIAGWTEGVQLMSVGSKYRF 211

Query: 174 YIPHNLAYGERGAGAAIPPFAALVFEVELLDI 205
            IP  LAYGER  G  IP  + LVFEVEL+ I
Sbjct: 212 VIPAELAYGERDNG-TIPANSTLVFEVELVSI 242