Pairwise Alignments

Query, 190 a.a., lysine transporter LysM from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., peptidase M23B (RefSeq) from Shewanella loihica PV-4

 Score = 46.6 bits (109), Expect = 6e-10
 Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 16/143 (11%)

Query: 60  LMVIPLPDKQDVAA-------------ETPATSKRIEVGINTQSLSEQRTQAQTALKSSA 106
           +M +P P K+ + A             +  A  +RI V ++ +SL         A+++ +
Sbjct: 6   IMALPSPHKKILLAAGLVVGAALLWPSQKQALPQRIPVALDIESLVTNLHLGDEAVETVS 65

Query: 107 WQEYV--VRQGDTLSQVFRNNELPLTDINALVKVEGSDKPLSQIQAGQLIRFKLAENGQL 164
             ++V  +  GDTLS +F    +    +  +++ + +   L  ++ G +IRF L ++GQL
Sbjct: 66  HADFVKTIVSGDTLSGLFVEANVDQQTMYKVLEADLNILALDTLKPGNIIRFWLDDSGQL 125

Query: 165 DILQLERN-NQSVMFFRLSDGGF 186
           + L+L  N  + V+F R  +GGF
Sbjct: 126 EKLELYFNAARQVVFSRYEEGGF 148



 Score = 23.1 bits (48), Expect = 0.007
 Identities = 16/74 (21%), Positives = 33/74 (44%), Gaps = 1/74 (1%)

Query: 113 RQGDTLSQVFRNNELPLTDINALVKVEGSDKPLSQIQAGQLIRFKLAENGQLDILQLERN 172
           R G    ++ R   L    +N    +   D+  S +++ Q I  ++  N  +  + +ER 
Sbjct: 178 RIGLNAGEIQRIETLLKEKLNFARDLRAGDR-FSVLKSDQYIDGEVTGNSDILAITIERG 236

Query: 173 NQSVMFFRLSDGGF 186
             ++  ++ SDG F
Sbjct: 237 RSTINAYQNSDGNF 250