Pairwise Alignments

Query, 269 a.a., EamA family transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  147 bits (372), Expect = 2e-40
 Identities = 88/283 (31%), Positives = 147/283 (51%), Gaps = 45/283 (15%)

Query: 6   LAVWLLVLGNLAASLSDVAVKMLQGEVVPFQYMFLRQLFAFALIWPVWRKQPKVLRQLND 65
           L + LL+LGN+ ++L DV++K L  +     ++ LRQ+ A  ++ P+W    +       
Sbjct: 7   LGLGLLLLGNVFSALYDVSIKWLPAQSDATMFLLLRQVTAIVMMLPLWLYAGR------- 59

Query: 66  PKVTLIRAHLVLLGAGC-----MVVAISYLPLATANAVFYAAPLLMLPLSILFLKERPSR 120
           P+   ++ H++   +G      +++ +  LPLAT +++FY+APL+++ + +LFLKER S 
Sbjct: 60  PRTAFLKLHMIRANSGAVGGLLLILGLLSLPLATVSSLFYSAPLMIIVMGMLFLKERLSS 119

Query: 121 GKVIATVTGFLGVLIVLRPSQFHWAALFALGTACSLALFNLLARTIPERQPVVTTLMWTT 180
            +++ATV GF+G+LI+LRPS+ + AAL  L +A   A   L+ R +P  +    T++   
Sbjct: 120 QQILATVLGFIGILIILRPSEMNLAALAVLVSAIVFAANQLMLRWLPSSEAASVTVICYN 179

Query: 181 LFSLPISGLLAAAYWQPLSLSQW-------------------------------LWIAAS 209
           L SLP+  ++  A WQ  +   W                               + +A  
Sbjct: 180 LLSLPL--VIGFAAWQGFAGFSWPVLGIAVLSNIFLLAYQLFSVPAYRKAQAGEIAVAEY 237

Query: 210 SGLIFVAAFGAFWFAEMLDALTWLGIGMIILPLLPSAWLAKWW 252
           SGL+F   FG  WF E LD L WLG  +I+LP +    L + W
Sbjct: 238 SGLLFCVLFGWLWFDEWLDPLGWLGAALIVLPTILLPVLTRRW 280