Pairwise Alignments

Query, 460 a.a., ATP-dependent RNA helicase DbpA from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., DEAD/DEAH box helicase from Synechocystis sp000284455 PCC 6803

 Score =  254 bits (649), Expect = 4e-72
 Identities = 138/370 (37%), Positives = 220/370 (59%), Gaps = 3/370 (0%)

Query: 4   NSFAALNLKPELLANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVL 63
           ++FA L L  +    L  +GF   T IQ +++P +L G+D++ Q +TG+GKTAAF L ++
Sbjct: 7   STFADLGLSEKRCQLLADIGFEAPTQIQTEAIPLLLSGRDMLAQSQTGTGKTAAFALPLM 66

Query: 64  SNLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHG 123
             ++ +   +QAL+L PTRELA QVA  ++        + +L + GG  +  QI SLE G
Sbjct: 67  DRIDPEG-DLQALILTPTRELAQQVAEAMKDFSHE-RRLFILNVYGGQSIERQIRSLERG 124

Query: 124 AHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTLL 183
             I+VGTPGR++D + + ++ L  +  +VLDEAD ML MGF + ++ I+   P  RQT  
Sbjct: 125 VQIVVGTPGRVIDLIDRKKLKLETIQWVVLDEADEMLSMGFIDDVKTILRKTPPTRQTAC 184

Query: 184 FSATYPASIEQIAQSVTRNALMIKVEATHDTSS-IRQYFYKVEGSAARDEALETLLLHHQ 242
           FSAT P  I+++      +  ++ V+ T  T + I Q  Y V    ++ +AL+ +L    
Sbjct: 185 FSATMPREIKELVNQFLNDPALVTVKQTQSTPTRIEQQLYHVPRGWSKAKALQPILEMED 244

Query: 243 PTSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDV 302
           P S+++F  TK+   ++   L ++G SV E HG++ Q +R++ + +F +  I ++VATD+
Sbjct: 245 PESAIIFVRTKQTAADLTSRLQEAGHSVDEYHGNLSQSQRERLVHRFRDGKIKLVVATDI 304

Query: 303 AARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDEYM 362
           AARGLDV+NL  V N+DL  + E ++HRIGRTGRAG  G A +     +   +  I+  +
Sbjct: 305 AARGLDVNNLSHVVNFDLPDNAETYIHRIGRTGRAGKTGKAIALVEPIDRRLLRSIENRL 364

Query: 363 DIAIEPSTLP 372
              IE  T+P
Sbjct: 365 KQQIEVCTIP 374