Pairwise Alignments

Query, 460 a.a., ATP-dependent RNA helicase DbpA from Vibrio cholerae E7946 ATCC 55056

Subject, 457 a.a., ATP-dependent RNA helicase DbpA from Enterobacter sp. TBS_079

 Score =  467 bits (1201), Expect = e-136
 Identities = 244/457 (53%), Positives = 319/457 (69%), Gaps = 3/457 (0%)

Query: 5   SFAALNLKPEL-LANLETMGFATMTPIQAQSLPAILKGQDVIGQGKTGSGKTAAFGLGVL 63
           +F+ LN+ P   L NL  +G+ TMTP+QA +LPAIL+G+DV  Q KTGSGKTAAFGLG+L
Sbjct: 3   AFSTLNVLPAAQLDNLNELGYLTMTPVQAATLPAILEGRDVRVQAKTGSGKTAAFGLGLL 62

Query: 64  SNLNVKRFRVQALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQIGSLEHG 123
            +++   F+ Q+LVLCPTRELADQVA ++R L R + N K+LTLCGG P G Q  SL+H 
Sbjct: 63  QHIDAALFQTQSLVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGAQRDSLQHP 122

Query: 124 AHILVGTPGRILDHLSKDRIDLSELNTLVLDEADRMLEMGFQEALEAIIAAAPAERQTLL 183
            HI+V TPGR+LDHL K  + L  L+TLV+DEADRML+MGF +A++ +I  APA+RQTLL
Sbjct: 123 PHIIVATPGRLLDHLQKGTVSLDALHTLVMDEADRMLDMGFSDAIDEVIRFAPADRQTLL 182

Query: 184 FSATYPASIEQIAQSVTRNALMIKVEATHDTSSIRQYFYKVEGSAARDEALETLLLHHQP 243
           FSAT+P +I  I+  V +N L I++++     +I Q FY+      +   L+ +L  HQP
Sbjct: 183 FSATWPEAIAAISGRVQKNPLTIEIDSVDALPAIEQQFYET-SQHGKIALLQKVLSQHQP 241

Query: 244 TSSVVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDVA 303
            S VVFCNTK++ Q V DAL+ +G S + LHGD+EQR+RDQ LV+FAN S  +LVATDVA
Sbjct: 242 ASCVVFCNTKKDCQAVCDALNAAGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVA 301

Query: 304 ARGLDVDNLDAVFNYDLSRDPEVHVHRIGRTGRAGSKGLAFSFFSDNESYRVAQIDEYMD 363
           ARGLD+ +L+ V NY+L+ DPEVHVHRIGRT RAG+ GLA SF +  E+ R   + E + 
Sbjct: 302 ARGLDIKSLELVVNYELAWDPEVHVHRIGRTARAGNSGLAISFCAPEEAQRANILSEMLQ 361

Query: 364 IAIEPSTLPQPAAGARPYAANMVTIQIDGGKKDKVRPGDILGALTSDGELTAEHIGKINL 423
           I +     P   +   P  A M T+ IDGGKK K+RPGD+LGALT D  L    IGKI +
Sbjct: 362 IKLNWVNAPGNVS-LVPLEAEMATLCIDGGKKAKMRPGDVLGALTGDVGLDGADIGKITV 420

Query: 424 FPMRAYVAVHKKIATKALNKIANGKMKGRQFRARLLK 460
            P   YVAV + +A KA  ++ NGK+KG+  R RLLK
Sbjct: 421 HPAHVYVAVRQSVAHKAWKQLQNGKIKGKTCRVRLLK 457