Pairwise Alignments

Query, 189 a.a., Crp/Fnr family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., cyclic nucleotide-binding protein (RefSeq) from Shewanella sp. ANA-3

 Score =  129 bits (325), Expect = 3e-35
 Identities = 77/183 (42%), Positives = 106/183 (57%), Gaps = 10/183 (5%)

Query: 8   YLKQHGFSDAECAQLQSVAQPLELPTRHVLVAQGETTPFAYWVLAGLCHACYLTEEGKSF 67
           YL   G      A L + A+ L       L+ QGE  PFAY+V+ G+  AC+ T+EG   
Sbjct: 23  YLLALGAEPERLAPLLTQARALSYQPGECLLPQGERQPFAYFVVDGIVRACHYTQEGSER 82

Query: 68  SKEFYWEQDWAIGFESLLREQASPFMLETLSPVQLMGVPIEVLREWRSSGHPLYQR---- 123
            KEFY+E +    + S L++  +P+ LET++  +L+ +P+ VL E      P  QR    
Sbjct: 83  CKEFYFEGELCFLYSSWLKQDIAPYQLETVTACRLVQMPLAVLNE------PTMQRVQLA 136

Query: 124 LLETQLLYKEQKERFMLLYRPEQRYQVMCTQFPDLMARLCDHHIAAYLGITPISLSRIKA 183
           LL+ QLLYKEQKE F+LL  PEQRY  +   FP  + RL    +A Y+GIT ISLSRI+ 
Sbjct: 137 LLKQQLLYKEQKEAFLLLNTPEQRYLHLLQYFPLWVERLTHAQLANYIGITAISLSRIRR 196

Query: 184 RLR 186
           RL+
Sbjct: 197 RLQ 199