Pairwise Alignments

Query, 653 a.a., 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase from Vibrio cholerae E7946 ATCC 55056

Subject, 657 a.a., bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase periplasmic protein from Sinorhizobium meliloti 1021

 Score =  576 bits (1484), Expect = e-168
 Identities = 310/667 (46%), Positives = 417/667 (62%), Gaps = 33/667 (4%)

Query: 5   IKPVSLAVL-GGLLAMAGPVM---------ADTIKLRIVETTDIHTNLMDYDYYKDKASD 54
           + P+S   L GGL A +  V+         A+   LRI+ETTD+H ++  YDYY DK +D
Sbjct: 4   LHPISRRTLIGGLAATSAFVVLHPFSTRAAANQAHLRIMETTDLHVHVFPYDYYADKPND 63

Query: 55  QIGLTRAATLVKQARAEVENSVLVDNGDLIQGSPMGDYMAAK-GIKAGEVHPVYKAMNPL 113
            +GL R A++V   RAE  N+VLVDNGD +QG+PMGDY+A K G+K G++HPV  AMN L
Sbjct: 64  TLGLARTASIVDAIRAEAANAVLVDNGDFLQGNPMGDYIAYKRGMKEGDMHPVIAAMNVL 123

Query: 114 GYDVGNIGNHEFNYGLEFLKETINDAAFPYINANVFDA------KTGQHLFTPYVIKEHS 167
           GYD G +GNHEFNYGL+F+   IN A FP + AN+         +  +    PYVI +  
Sbjct: 124 GYDCGTLGNHEFNYGLDFMFNVINGANFPIVCANLTKGAMAAAPRQDELFLKPYVILDRK 183

Query: 168 FKDTDGEAHTIKVGYIGFVPPQIMVWDKKNLEGKVTAADIKQTAEKLIPEMKAKGADVIV 227
            KD  G+ H I++G IGFVPPQIM WD KNLEGK  A DI + AE  +P+M+ +GAD+++
Sbjct: 184 VKDGAGQEHPIRIGLIGFVPPQIMTWDAKNLEGKANARDIVKAAEAWVPQMREEGADIVI 243

Query: 228 AIPHSGISTDEYQAGAENSVYYLTQVKGIDAIAFGHSHAVFPGKDFANVPGADIDKGTIN 287
           A+ HSGI    Y    EN+   L  ++GIDAI  GHSH  FPG  F   PG D  KG I+
Sbjct: 244 ALSHSGIGQQAYAENLENASVPLAAIEGIDAIVTGHSHLDFPGPKFDGTPGVDNAKGLIS 303

Query: 288 GVTAVMPGRWGSHVGVMDLTLEKQQGRWAVTSGQSEARPIFDKANKKALVEA--DATMVQ 345
           G   VM G WGSH+G++DL LE+  G+W V    SEARPIF +  KK + E      ++ 
Sbjct: 304 GKPGVMGGFWGSHLGLIDLLLERDGGQWRVIGSTSEARPIFRREEKKVIAEVGDKPEVLA 363

Query: 346 ALQHDHQGTRDFVNQPIGKANDVMYSFLSLVQDDPTVQIVNLAQKDYVERFIQGDPNLDG 405
           A Q DH+ T  +V  P+GK +  +YS+ +LV DDP+VQIV+ AQ  Y+   ++   + D 
Sbjct: 364 AAQKDHEATLAYVRTPVGKTSAPLYSYFALVADDPSVQIVSQAQTWYIREMLKDTEHSD- 422

Query: 406 LPVLSAAAPFKAGGRKDDPNGFTEVEAGELTFRNAADLYLYPNTLVTMKVSGQQLKEWLE 465
           LPVLSAAAPFKAGGR      +T+V AG++  +N ADLYLYPNT+  + ++G++++ WLE
Sbjct: 423 LPVLSAAAPFKAGGR-GGAEYYTDVPAGDIAIKNVADLYLYPNTVQAVVITGEEVRNWLE 481

Query: 466 CSAGQFNQIDVTSSAPQSLINWDGFRTYNFDVIDGVNYQIDVTQPARYDGDCKLINPNSQ 525
            SAG FN+I    S   SLIN D F +YNFDVIDGV YQI ++QPA+YD D  + NP + 
Sbjct: 482 MSAGIFNRI-APGSVDASLINGD-FPSYNFDVIDGVTYQIVLSQPAKYDKDGNVANPEAS 539

Query: 526 RIVQLTYQGKPIDTQQTFLIATNNYRA-YSNKFPGTGAEFVAFDSPDENRTVVADYIARV 584
           RI  L + G+PID +Q F++ATNNYRA     FPG   + V F +PD NR V+  YI   
Sbjct: 540 RIRDLKFDGRPIDPKQRFVVATNNYRAGGGGNFPGIAGDKVVFVAPDTNRDVIVRYIV-- 597

Query: 585 SKDKGEVTPSADNNWSFAPISSKTKLDIRFETSPSDKATQFIKQKGQYPMTRVASDDVGF 644
             ++G + PSAD NW+FAP   +    + F++ P  +A QF+ +     +        GF
Sbjct: 598 --EQGTINPSADANWTFAP---QKDTSVLFDSGP--RARQFLAEVKAVKIENAGDGSDGF 650

Query: 645 AVYRIDL 651
           A +RI L
Sbjct: 651 ARFRIKL 657